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  5. Spa_g25433

Spa_g25433


Description : transcriptional co-regulator *(Pirin) & original description: none


Gene families : OG0002091 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002091_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g25433
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00020p00186610 evm_27.TU.AmTr_v1... Pirin-like protein OS=Solanum lycopersicum 0.03 OrthoFinder output from all 47 species
AT1G50590 No alias RmlC-like cupins superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G43120 No alias RmlC-like cupins superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G59220 PRN, PRN1, ATPIRIN1 pirin 0.05 OrthoFinder output from all 47 species
Adi_g097979 No alias transcriptional co-regulator *(Pirin) & original... 0.03 OrthoFinder output from all 47 species
Adi_g116008 No alias transcriptional co-regulator *(Pirin) & original... 0.03 OrthoFinder output from all 47 species
Aob_g07773 No alias transcriptional co-regulator *(Pirin) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0011.g012617 No alias transcriptional co-regulator *(Pirin) & original... 0.03 OrthoFinder output from all 47 species
Ceric.05G030000.1 Ceric.05G030000 transcriptional co-regulator *(Pirin) & original... 0.03 OrthoFinder output from all 47 species
Dac_g14581 No alias transcriptional co-regulator *(Pirin) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g37769 No alias transcriptional co-regulator *(Pirin) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01038385001 PRN, PRN1, ATPIRIN1 Pirin-like protein OS=Solanum lycopersicum 0.03 OrthoFinder output from all 47 species
LOC_Os08g27720.1 LOC_Os08g27720 Pirin-like protein OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
Len_g23606 No alias transcriptional co-regulator *(Pirin) & original... 0.03 OrthoFinder output from all 47 species
Pp3c2_10320V3.1 Pp3c2_10320 RmlC-like cupins superfamily protein 0.02 OrthoFinder output from all 47 species
Smo446995 No alias Pirin-like protein OS=Solanum lycopersicum 0.02 OrthoFinder output from all 47 species
Solyc09g098180.4.1 Solyc09g098180 Pirin-like protein OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
Zm00001e034512_P001 Zm00001e034512 Pirin-like protein At1g50590 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008198 ferrous iron binding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003829 Pirin_N_dom 109 202
IPR008778 Pirin_C_dom 255 360
No external refs found!