Spa_g24654


Description : not classified & original description: none


Gene families : OG0000607 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000607_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g24654

Target Alias Description ECC score Gene Family Method Actions
Aop_g38754 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g01848 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31930 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os04g45140.1 LOC_Os04g45140 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g01150.1 LOC_Os08g01150 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10425862g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g39560 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28357 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g59552 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32305 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33218 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g025770.4.1 Solyc03g025770 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e024271_P001 Zm00001e024271 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009092 homoserine metabolic process IEP HCCA
BP GO:0019346 transsulfuration IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050667 homocysteine metabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006598 CAP10 89 479
No external refs found!