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  5. Spa_g24557

Spa_g24557


Description : EC_3.2 glycosylase & original description: none


Gene families : OG0000517 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000517_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g24557

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00188990 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 OrthoFinder output from all 47 species
AMTR_s00025p00220320 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 OrthoFinder output from all 47 species
AMTR_s00131p00072670 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 OrthoFinder output from all 47 species
AT5G58090 No alias O-Glycosyl hydrolases family 17 protein 0.02 OrthoFinder output from all 47 species
Ala_g17256 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g25671 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11947 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01364 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g12676 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01002584001 No alias Glucan endo-1,3-beta-glucosidase 5 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_05521 No alias Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os02g04670.1 LOC_Os02g04670 Glucan endo-1,3-beta-glucosidase 6 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Lfl_g12499 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g09721 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g09742 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02049 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10586 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37842 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04467 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000853 No alias EC_3.2 glycosylase & original description: CDS=364-1887 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006168 No alias EC_3.2 glycosylase & original description: CDS=48-1523 0.03 OrthoFinder output from all 47 species
Sam_g28221 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28257 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g006210.3.1 Solyc05g006210 Glucan endo-1,3-beta-glucosidase 5 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc12g019890.2.1 Solyc12g019890 Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Tin_g01894 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e021574_P001 Zm00001e021574 Glucan endo-1,3-beta-glucosidase 6 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000490 Glyco_hydro_17 2 240
IPR012946 X8 261 331
No external refs found!