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  5. Spa_g22719

Spa_g22719 (RCY1, ATRCY1)


Aliases : RCY1, ATRCY1

Description : regulatory protein *(CYCL) of cell cycle & original description: none


Gene families : OG0001825 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001825_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g22719
Cluster HCCA: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
Ala_g38143 RCY1, ATRCY1 regulatory protein *(CYCL) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Als_g14430 RCY1, ATRCY1 regulatory protein *(CYCL) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Aop_g38663 RCY1, ATRCY1 regulatory protein *(CYCL) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ceric.29G000300.1 RCY1, ATRCY1,... regulatory protein *(CYCL) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Dac_g32942 RCY1, ATRCY1 regulatory protein *(CYCL) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Dde_g19611 RCY1, ATRCY1 regulatory protein *(CYCL) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Len_g47066 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g47067 RCY1, ATRCY1 regulatory protein *(CYCL) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Nbi_g09786 RCY1, ATRCY1 regulatory protein *(CYCL) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Ore_g09197 RCY1, ATRCY1 regulatory protein *(CYCL) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ore_g35333 RCY1, ATRCY1 regulatory protein *(CYCL) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Tin_g09180 RCY1, ATRCY1 regulatory protein *(CYCL) of cell cycle & original... 0.08 OrthoFinder output from all 47 species
Tin_g31762 RCY1, ATRCY1 regulatory protein *(CYCL) of cell cycle & original... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006671 Cyclin_N 26 154
No external refs found!