1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g21753

Spa_g21753


Description : translation ribosome recycling factor *(RRF) & original description: none


Gene families : OG0006739 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006739_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g21753
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00134010 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Adi_g018318 No alias translation ribosome recycling factor *(RRF) & original... 0.04 OrthoFinder output from all 47 species
Aop_g14062 No alias translation ribosome recycling factor *(RRF) & original... 0.03 OrthoFinder output from all 47 species
Ceric.03G014600.1 Ceric.03G014600 translation ribosome recycling factor *(RRF) & original... 0.05 OrthoFinder output from all 47 species
Dac_g07844 No alias translation ribosome recycling factor *(RRF) & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01001818001 No alias Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
Gb_08324 No alias RRF translation ribosome recycling factor 0.04 OrthoFinder output from all 47 species
LOC_Os04g41300.1 LOC_Os04g41300 RRF translation ribosome recycling factor 0.05 OrthoFinder output from all 47 species
Nbi_g00582 No alias translation ribosome recycling factor *(RRF) & original... 0.05 OrthoFinder output from all 47 species
Pir_g41215 No alias translation ribosome recycling factor *(RRF) & original... 0.04 OrthoFinder output from all 47 species
Solyc11g007740.2.1 Solyc11g007740 RRF translation ribosome recycling factor 0.04 OrthoFinder output from all 47 species
Tin_g19048 No alias translation ribosome recycling factor *(RRF) & original... 0.09 OrthoFinder output from all 47 species
Zm00001e041130_P001 Zm00001e041130 RRF translation ribosome recycling factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004334 fumarylacetoacetase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016822 hydrolase activity, acting on acid carbon-carbon bonds IEP HCCA
MF GO:0016823 hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR023584 Ribosome_recyc_fac_dom 103 265
No external refs found!