1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g20397

Spa_g20397


Description : not classified & original description: none


Gene families : OG0001922 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001922_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g20397
Cluster HCCA: Cluster_193

Target Alias Description ECC score Gene Family Method Actions
AT4G17890 AGD8 ARF-GAP domain 8 0.05 OrthoFinder output from all 47 species
Adi_g064067 AGD8 class II ARF-GAP ARF-GTPase-activating protein &... 0.08 OrthoFinder output from all 47 species
Aev_g42782 AGD8 class II ARF-GAP ARF-GTPase-activating protein &... 0.06 OrthoFinder output from all 47 species
Ala_g01748 AGD9 class II ARF-GAP ARF-GTPase-activating protein &... 0.07 OrthoFinder output from all 47 species
Als_g00881 AGD8 class II ARF-GAP ARF-GTPase-activating protein &... 0.08 OrthoFinder output from all 47 species
Aob_g04110 AGD8 class II ARF-GAP ARF-GTPase-activating protein &... 0.02 OrthoFinder output from all 47 species
Aop_g38745 AGD8 class II ARF-GAP ARF-GTPase-activating protein &... 0.03 OrthoFinder output from all 47 species
Ceric.01G027900.1 AGD8, Ceric.01G027900 class II ARF-GAP ARF-GTPase-activating protein &... 0.05 OrthoFinder output from all 47 species
Dac_g14431 AGD9 class II ARF-GAP ARF-GTPase-activating protein &... 0.09 OrthoFinder output from all 47 species
Dcu_g04662 AGD8 class II ARF-GAP ARF-GTPase-activating protein &... 0.04 OrthoFinder output from all 47 species
Ehy_g11258 AGD8 class II ARF-GAP ARF-GTPase-activating protein &... 0.07 OrthoFinder output from all 47 species
Gb_36242 AGD8 class II ARF-GAP ARF-GTPase-activating protein 0.09 OrthoFinder output from all 47 species
LOC_Os03g63710.1 AGD8, LOC_Os03g63710 class II ARF-GAP ARF-GTPase-activating protein 0.09 OrthoFinder output from all 47 species
Len_g55685 AGD9 class II ARF-GAP ARF-GTPase-activating protein &... 0.07 OrthoFinder output from all 47 species
Lfl_g36558 AGD8 class II ARF-GAP ARF-GTPase-activating protein &... 0.07 OrthoFinder output from all 47 species
Mp8g08200.1 AGD8 class II ARF-GAP ARF-GTPase-activating protein 0.02 OrthoFinder output from all 47 species
Nbi_g29700 AGD8 class II ARF-GAP ARF-GTPase-activating protein &... 0.07 OrthoFinder output from all 47 species
Ppi_g31534 AGD8 class II ARF-GAP ARF-GTPase-activating protein &... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0046.g013330 AGD9 class II ARF-GAP ARF-GTPase-activating protein &... 0.03 OrthoFinder output from all 47 species
Sam_g10294 No alias class II ARF-GAP ARF-GTPase-activating protein &... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!