Spa_g19121 (SFD4, FADC, FAD6)


Aliases : SFD4, FADC, FAD6

Description : delta-12/delta-15 fatty acid desaturase & original description: none


Gene families : OG0001273 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0001273_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g19121
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
Aop_g01297 SFD4, FADC, FAD6 delta-12/delta-15 fatty acid desaturase & original... 0.11 OrthoFinder output from all 39 species
Aspi01Gene53241.t1 SFD4, FADC,... delta-12/delta-15 fatty acid desaturase & original... 0.01 OrthoFinder output from all 39 species
Cba_g13468 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Ceric.07G044600.1 SFD4, FADC,... delta-12/delta-15 fatty acid desaturase & original... 0.01 OrthoFinder output from all 39 species
Len_g35978 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Len_g41148 SFD4, FADC, FAD6 delta-12/delta-15 fatty acid desaturase & original... 0.04 OrthoFinder output from all 39 species
Lfl_g07005 SFD4, FADC, FAD6 delta-12/delta-15 fatty acid desaturase & original... 0.02 OrthoFinder output from all 39 species
Msp_g07910 SFD4, FADC, FAD6 delta-12/delta-15 fatty acid desaturase & original... 0.04 OrthoFinder output from all 39 species
Nbi_g23171 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Nbi_g40241 SFD4, FADC, FAD6 delta-12/delta-15 fatty acid desaturase & original... 0.02 OrthoFinder output from all 39 species
Pir_g07225 SFD4, FADC, FAD6 delta-12/delta-15 fatty acid desaturase & original... 0.02 OrthoFinder output from all 39 species
Pnu_g11735 SFD4, FADC, FAD6 delta-12/delta-15 fatty acid desaturase & original... 0.01 OrthoFinder output from all 39 species
Ppi_g33242 SFD4, FADC, FAD6 delta-12/delta-15 fatty acid desaturase & original... 0.02 OrthoFinder output from all 39 species
Tin_g03268 SFD4, FADC, FAD6 delta-12/delta-15 fatty acid desaturase & original... 0.09 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010206 photosystem II repair IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0030091 protein repair IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072488 ammonium transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR005804 FA_desaturase_dom 156 404
No external refs found!