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  5. Spa_g18930

Spa_g18930 (PGM, PGM1, STF1, ATPGMP)


Aliases : PGM, PGM1, STF1, ATPGMP

Description : EC_5.4 intramolecular transferase & original description: none


Gene families : OG0002065 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002065_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g18930
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene69546.t1 PGM, PGM1, STF1,... EC_5.4 intramolecular transferase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G070000.1 PGM, PGM1, STF1,... EC_5.4 intramolecular transferase & original... 0.06 OrthoFinder output from all 47 species
Cre06.g278210 PGM, PGM1, STF1, ATPGMP Carbohydrate metabolism.starch... 0.04 OrthoFinder output from all 47 species
GSVIVT01018452001 PGM, PGM1, STF1, ATPGMP Carbohydrate metabolism.starch... 0.03 OrthoFinder output from all 47 species
Lfl_g24014 PGM, PGM1, STF1, ATPGMP EC_5.4 intramolecular transferase & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g37562 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020037 PGM, PGM1, STF1, ATPGMP EC_5.4 intramolecular transferase & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR005845 A-D-PHexomutase_a/b/a-II 261 364
IPR005846 A-D-PHexomutase_a/b/a-III 372 495
IPR005843 A-D-PHexomutase_C 555 607
IPR005844 A-D-PHexomutase_a/b/a-I 89 228
No external refs found!