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  5. Spa_g18223

Spa_g18223 (ARR11)


Aliases : ARR11

Description : subgroup ARR-B transcription factor & original description: none


Gene families : OG0000124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000124_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g18223
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00101p00128190 evm_27.TU.AmTr_v1... Transcription factor LUX OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Aev_g08573 ARR11 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g12211 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g08389 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g42522 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27417.t1 LUX, PCL1,... component *(LUX) of circadian clock Evening complex (EC)... 0.03 OrthoFinder output from all 47 species
Aspi01Gene69302.t1 LUX, PCL1,... component *(LUX) of circadian clock Evening complex (EC)... 0.03 OrthoFinder output from all 47 species
Cba_g03227 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.16G029800.1 ARR11, Ceric.16G029800 subgroup ARR-B transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.22G035500.1 RR12, ARR12,... subgroup ARR-B transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.31G008400.1 Ceric.31G008400 subgroup ARR-B transcription factor & original... 0.04 OrthoFinder output from all 47 species
Cre02.g083750 LUX, PCL1 Transcription factor BOA OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre09.g410450 No alias Transcription factor LUX OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g15966 ARR11 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08391 LUX, PCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13817 No alias component *(LUX) of circadian clock Evening complex (EC)... 0.03 OrthoFinder output from all 47 species
Ehy_g14477 RR14, ARR14 not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01035051001 ARR1, RR1 RNA biosynthesis.transcriptional activation.ARR-B... 0.03 OrthoFinder output from all 47 species
LOC_Os06g08440.1 RR12, ARR12,... B-type cytokinin ARR response activator. transcription... 0.02 OrthoFinder output from all 47 species
Lfl_g24241 No alias MYB-RELATED transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g28555 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_114951g0010 ARR11 B-type cytokinin ARR response activator. transcription... 0.02 OrthoFinder output from all 47 species
MA_17547g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_601142g0010 RR2, ARR2 B-type cytokinin ARR response activator. transcription... 0.02 OrthoFinder output from all 47 species
Msp_g15114 MYBC1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09918 MYBC1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g08264 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.02 OrthoFinder output from all 47 species
Pnu_g03823 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.03 OrthoFinder output from all 47 species
Pnu_g06713 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05219 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011863 MYBC1 not classified & original description: CDS=1-1491 0.04 OrthoFinder output from all 47 species
Solyc07g005140.4.1 RR12, ARR12,... B-type cytokinin ARR response activator. transcription... 0.03 OrthoFinder output from all 47 species
Solyc12g010330.2.1 RR18, ARR18,... B-type cytokinin ARR response activator. transcription... 0.03 OrthoFinder output from all 47 species
Spa_g06387 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e028539_P002 ARR11, Zm00001e028539 B-type cytokinin ARR response activator. transcription... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 27 136
IPR001005 SANT/Myb 195 245
No external refs found!