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  5. Spa_g17274

Spa_g17274 (TRXF2, ATF2)


Aliases : TRXF2, ATF2

Description : F-type thioredoxin *(Trx-F) & original description: none


Gene families : OG0001099 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001099_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g17274
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene48932.t1 TRXF2, ATF2,... F-type thioredoxin *(Trx-F) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.37G049100.1 ATHM4, TRX-M4,... not classified & original description: pacid=50616292... 0.03 OrthoFinder output from all 47 species
Dde_g12943 TRXF2, ATF2 F-type thioredoxin *(Trx-F) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g68480.1 TRXF2, ATF2,... F-type thioredoxin 0.02 OrthoFinder output from all 47 species
Pir_g65672 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 121 211
No external refs found!