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  5. Spa_g16816

Spa_g16816


Description : component *(GID8) of GID ubiquitination complex & original description: none


Gene families : OG0003247 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003247_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g16816
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
Aev_g05110 No alias component *(GID8) of GID ubiquitination complex &... 0.02 OrthoFinder output from all 47 species
Cba_g19499 No alias component *(GID8) of GID ubiquitination complex &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001525.10 No alias Protein GID8 homolog OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Mp6g15330.1 No alias component GID8 of ubiquitin protein ligase complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR024964 CTLH/CRA 62 204
IPR006594 LisH 26 51
No external refs found!