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  5. Spa_g16164

Spa_g16164 (CML42)


Aliases : CML42

Description : not classified & original description: none


Gene families : OG0000205 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000205_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g16164
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00316p00014990 evm_27.TU.AmTr_v1... Probable calcium-binding protein CML44 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G21550 No alias Calcium-binding EF-hand family protein 0.03 OrthoFinder output from all 47 species
AT2G43290 MSS3 Calcium-binding EF-hand family protein 0.07 OrthoFinder output from all 47 species
AT5G44460 CML43 calmodulin like 43 0.02 OrthoFinder output from all 47 species
Aev_g00406 UNE14 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g05135 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g05860 UNE14 calcium sensor *(CML) & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g08071 CML43 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g09654 CML42 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g12844 CML42 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g20328 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g34766 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37168 UNE14 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g04699 CML42 calcium sensor *(CML) & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g05225 AGD11 calcium sensor *(CML) & original description: none 0.09 OrthoFinder output from all 47 species
Ala_g20304 AGD11 calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g21677 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g27706 CML42 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g27813 AGD11 calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g47923 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g57706 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03909 AGD11 calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g13274 CML42 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g14961 UNE14 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g31301 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g36467 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05105 CML42 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06373.t1 UNE14, Aspi01Gene06373 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene06375.t1 UNE14, Aspi01Gene06375 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene11697.t1 CML42, Aspi01Gene11697 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13801.t1 UNE14, Aspi01Gene13801 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28477.t1 UNE14, Aspi01Gene28477 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34632.t1 CML42, Aspi01Gene34632 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34652.t1 CML42, Aspi01Gene34652 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene34654.t1 CML42, Aspi01Gene34654 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34662.t1 CML42, Aspi01Gene34662 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34663.t1 CML42, Aspi01Gene34663 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34666.t1 UNE14, Aspi01Gene34666 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34907.t1 UNE14, Aspi01Gene34907 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34910.t1 UNE14, Aspi01Gene34910 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34915.t1 UNE14, Aspi01Gene34915 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene40818.t1 UNE14, Aspi01Gene40818 calcium sensor *(CML) & original description: none 0.08 OrthoFinder output from all 47 species
Azfi_s0143.g051442 RHS1 not classified & original description: CDS=1-564 0.04 OrthoFinder output from all 47 species
Azfi_s0367.g066979 UNE14 calcium sensor *(CML) & original description: CDS=1-1074 0.03 OrthoFinder output from all 47 species
Cba_g42977 UNE14 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G109000.1 CML43, Ceric.04G109000 calcium sensor *(CML) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.06G016200.1 CPK17, Ceric.06G016200 calcium sensor *(CML) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G067000.1 Ceric.17G067000 not classified & original description: pacid=50618804... 0.03 OrthoFinder output from all 47 species
Ceric.25G037500.1 CML42, Ceric.25G037500 calcium sensor *(CML) & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g04202 UNE14 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g11456 CML42 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g12031 CML42 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g12957 UNE14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25081 UNE14 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g33458 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g34789 AGD11 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g45457 UNE14 calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g00701 CML43 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03398 CML42 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g18813 UNE14 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g22617 CML43 calcium sensor *(CML) & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g41575 UNE14 calcium sensor *(CML) & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g51157 UNE14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g00480 No alias calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g25457 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_28442 UNE14 Calmodulin-like protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_28443 UNE14 Calmodulin-like protein 2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_30819 UNE14 Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
LOC_Os03g21380.2 CML42, LOC_Os03g21380 Probable calcium-binding protein CML27 OS=Oryza sativa... 0.09 OrthoFinder output from all 47 species
LOC_Os04g41540.1 AGD11, LOC_Os04g41540 Probable calcium-binding protein CML22 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
LOC_Os05g24780.1 CML42, LOC_Os05g24780 Probable calcium-binding protein CML21 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
LOC_Os06g07560.1 UNE14, LOC_Os06g07560 Probable calcium-binding protein CML30 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
LOC_Os09g24580.1 LOC_Os09g24580 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g04938 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g23777 CML42 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29581 MSS3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g29582 TCH3, ATCAL4 not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10289213g0010 CML41 Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10431273g0010 CML41 Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_10432950g0010 CML41 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_18054g0010 CML43 Probable calcium-binding protein CML32 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
MA_18054g0030 CML42 Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_224196g0010 CML42 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_393053g0010 CML41 Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_641437g0010 CML42 Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_66990g0010 UNE14 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_822732g0010 CML39, CML37 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_9257733g0010 UNE14 Calcium-binding protein CAST OS=Solanum tuberosum... 0.02 OrthoFinder output from all 47 species
Mp6g10070.1 UNE14 Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Mp6g18000.1 UNE14 Calmodulin-like protein 3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Mp6g20440.1 CML42 Probable calcium-binding protein CML22 OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
Mp6g20470.1 UNE14 Probable calcium-binding protein CML22 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Msp_g25033 UNE14 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g42557 AGD11 calcium sensor *(CML) & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g10478 UNE14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g14285 UNE14 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g07967 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10055 CML42 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g03113 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g05778 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08284 UNE14 calcium sensor *(CML) & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g08285 UNE14 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g18052 AGD11 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Smo96597 AGD11 Calmodulin-like protein 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc12g009630.3.1 Solyc12g009630 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g33279 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12245 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g16288 UNE14 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e001557_P001 CML42, Zm00001e001557 Probable calcium-binding protein CML27 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
Zm00001e038252_P001 CML43, Zm00001e038252 Probable calcium-binding protein CML27 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 219 290
IPR002048 EF_hand_dom 119 139
No external refs found!