Spa_g15681


Description : not classified & original description: none


Gene families : OG0002898 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002898_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g15681

Target Alias Description ECC score Gene Family Method Actions
Ala_g08127 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19938 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g29310 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g22073 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g31837 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.10G053300.1 Ceric.10G053300 not classified & original description: pacid=50613105... 0.05 OrthoFinder output from all 47 species
Ceric.13G081400.1 Ceric.13G081400 not classified & original description: pacid=50635650... 0.03 OrthoFinder output from all 47 species
Dac_g16429 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_73880g0010 No alias transcription factor (GeBP) 0.03 OrthoFinder output from all 47 species
Ore_g01755 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g10172 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g11131 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006412 translation IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007592 GEBP 193 290
No external refs found!