Aliases : ATUBC1, UBC1
Description : E2 ubiquitin-conjugating enzyme *(UBC1) & original description: none
Gene families : OG0001764 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001764_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Ala_g04277 | ATUBC1, UBC1 | E2 ubiquitin-conjugating enzyme *(UBC1) & original... | 0.05 | OrthoFinder output from all 47 species | |
Als_g50236 | ATUBC1, UBC1 | E2 ubiquitin-conjugating enzyme *(UBC1) & original... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000737.3 | ATUBC1, UBC1 | Protein degradation.peptide tagging.Ubiquitin... | 0.01 | OrthoFinder output from all 47 species | |
Cre06.g294850 | ATUBC1, UBC1 | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01022467001 | ATUBC2, UBC2 | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os03g57790.1 | ATUBC2, UBC2,... | ubiquitin-conjugating E2 protein | 0.07 | OrthoFinder output from all 47 species | |
MA_16089g0010 | ATUBC2, UBC2 | ubiquitin-conjugating E2 protein | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g07737 | ATUBC1, UBC1 | E2 ubiquitin-conjugating enzyme *(UBC1) & original... | 0.02 | OrthoFinder output from all 47 species | |
Tin_g22958 | ATUBC1, UBC1 | E2 ubiquiTin-conjugaTing enzyme *(UBC1) & original... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e029917_P003 | ATUBC2, UBC2,... | ubiquitin-conjugating E2 protein | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000966 | RNA 5'-end processing | IEP | HCCA |
BP | GO:0001682 | tRNA 5'-leader removal | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0008033 | tRNA processing | IEP | HCCA |
CC | GO:0016592 | mediator complex | IEP | HCCA |
CC | GO:0030677 | ribonuclease P complex | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
BP | GO:0099116 | tRNA 5'-end processing | IEP | HCCA |
MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
CC | GO:1902494 | catalytic complex | IEP | HCCA |
CC | GO:1902555 | endoribonuclease complex | IEP | HCCA |
CC | GO:1905348 | endonuclease complex | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000608 | UBQ-conjugat_E2 | 8 | 144 |
No external refs found! |