Spa_g12510 (AtWRKY20, WRKY20)

Aliases : AtWRKY20, WRKY20

Description : WRKY-type transcription factor & original description: none

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g12510

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00013p00160270	WRKY75,...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
AMTR_s00015p00181570	WRKY6, ATWRKY6,...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
AMTR_s00015p00228580	WRKY53,...	RNA biosynthesis.transcriptional activation.WRKY...	0.04	OrthoFinder output from all 47 species
AMTR_s00045p00128140	WRKY42,...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
AMTR_s00156p00038330	WRKY9, ATWRKY9,...	RNA biosynthesis.transcriptional activation.WRKY...	0.06	OrthoFinder output from all 47 species
AT1G80840	ATWRKY40, WRKY40	WRKY DNA-binding protein 40	0.03	OrthoFinder output from all 47 species
AT2G47260	WRKY23, ATWRKY23	WRKY DNA-binding protein 23	0.02	OrthoFinder output from all 47 species
AT4G23810	WRKY53, ATWRKY53	WRKY family transcription factor	0.02	OrthoFinder output from all 47 species
AT5G49520	WRKY48, ATWRKY48	WRKY DNA-binding protein 48	0.02	OrthoFinder output from all 47 species
Adi_g052345	WRKY26	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g09415	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g13852	WRKY43, ATWRKY43	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g47915	WRKY43, ATWRKY43	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g04676	WRKY4	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g25778	ATWRKY57, WRKY57	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Als_g21563	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g34105	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g18287	WRKY33, ATWRKY33	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g63033	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Aspi01Gene00114.t1	WRKY53,...	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene65373.t1	WRKY26, Aspi01Gene65373	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g15071	ATWRKY58, WRKY58	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g15116	WRKY3	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g27210	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g61706	WRKY4	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g02916	WRKY53, ATWRKY53	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g10501	WRKY48, ATWRKY48	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g24199	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g42615	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g06529	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Dde_g12270	WRKY55, ATWRKY55	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g23435	ATWRKY45, WRKY45	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Ehy_g26904	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01018300001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
GSVIVT01020864001	WRKY28, ATWRKY28	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
GSVIVT01022259001	ATWRKY13, WRKY13	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
GSVIVT01030174001	WRKY54, ATWRKY54	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
Gb_08731	ATWRKY57, WRKY57	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Gb_39366	WRKY31, ATWRKY31	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Gb_40257	ATWRKY71, WRKY71	transcription factor (WRKY)	0.05	OrthoFinder output from all 47 species
LOC_Os01g09080.1	WRKY72,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os01g14440.1	WRKY6, ATWRKY6,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os03g55080.1	ATWRKY57,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os04g39570.1	WRKY2, ATWRKY2,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os04g46060.1	LOC_Os04g46060	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Lfl_g36039	ATWRKY57, WRKY57	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
MA_7831917g0010	AtWRKY47, WRKY47	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
MA_892467g0010	WRKY72, ATWRKY72	transcription factor (WRKY)	0.05	OrthoFinder output from all 47 species
Mp7g06550.1	ATWRKY57, WRKY57	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Msp_g08798	WRKY31, ATWRKY31	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g19074	ATWRKY51, WRKY51	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g26331	WRKY3	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g35939	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g01052	ATWRKY45, WRKY45	WRKY-type transcription factor & original description: none	0.07	OrthoFinder output from all 47 species
Nbi_g16993	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g34132	WRKY75, ATWRKY75	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g05077	ATWRKY50, WRKY50	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g11298	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g16064	WRKY3	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g16309	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g22356	ATWRKY57, WRKY57	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g18429	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g29855	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0108.g020447	WRKY72, ATWRKY72	WRKY-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0216.g026051	WRKY42, AtWRKY42	WRKY-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Sam_g10405	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g38149	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Smo66769	WRKY4	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
Solyc03g116890.3.1	ATWRKY40,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Spa_g05540	WRKY4	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Spa_g07958	WRKY67, ATWRKY67	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g10733	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g15879	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g22896	ABO3, WRKY63, ATWRKY63	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g31202	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Spa_g38478	WRKY4	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g08676	WRKY2, ATWRKY2	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g10526	WRKY4	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Tin_g13035	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Tin_g14392	ATWRKY45, WRKY45	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g20270	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g22055	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e005219_P001	WRKY1, ZAP1,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e026828_P002	ATWRKY50,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e031901_P001	WRKY33,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0009605	response to external stimulus	IEP	HCCA
BP	GO:0009606	tropism	IEP	HCCA
BP	GO:0010274	hydrotropism	IEP	HCCA
BP	GO:0050896	response to stimulus	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	481	537
IPR003657	WRKY_dom	304	358

External Links

No external refs found!

Spa_g12510 (AtWRKY20, WRKY20)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation