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  5. Spa_g12216

Spa_g12216 (AP19)


Aliases : AP19

Description : small subunit sigma of AP-3 Golgi to vacuole cargo adaptor complex & original description: none


Gene families : OG0004438 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004438_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g12216

Target Alias Description ECC score Gene Family Method Actions
Adi_g025276 AP19 small subunit sigma of AP-3 Golgi to vacuole cargo... 0.04 OrthoFinder output from all 47 species
Ala_g00382 AP19 small subunit sigma of AP-3 Golgi to vacuole cargo... 0.04 OrthoFinder output from all 47 species
Als_g13578 AP19 small subunit sigma of AP-3 Golgi to vacuole cargo... 0.04 OrthoFinder output from all 47 species
Aob_g34008 AP19 small subunit sigma of AP-3 Golgi to vacuole cargo... 0.02 OrthoFinder output from all 47 species
Azfi_s0343.g065719 AP19 small subunit sigma of AP-1 trans-Golgi network cargo... 0.04 OrthoFinder output from all 47 species
Ceric.09G068600.1 AP19, Ceric.09G068600 small subunit sigma of AP-3 Golgi to vacuole cargo... 0.03 OrthoFinder output from all 47 species
Ceric.15G038200.1 AP19, Ceric.15G038200 small subunit sigma of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Cre09.g394100 AP19 Vesicle trafficking.clathrin coated vesicle (CCV)... 0.06 OrthoFinder output from all 47 species
Dac_g17595 AP19 small subunit sigma of AP-3 Golgi to vacuole cargo... 0.04 OrthoFinder output from all 47 species
Dcu_g12628 AP19 small subunit sigma of AP-1 trans-Golgi network cargo... 0.04 OrthoFinder output from all 47 species
Ehy_g01910 No alias small subunit sigma of AP-3 Golgi to vacuole cargo... 0.04 OrthoFinder output from all 47 species
GSVIVT01028912001 AP19 Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 OrthoFinder output from all 47 species
Gb_36359 No alias AP-1 complex subunit sigma-2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os03g57040.1 AP19, LOC_Os03g57040 small subunit sigma of AP-1 trans-Golgi network cargo... 0.05 OrthoFinder output from all 47 species
Msp_g27376 AP19 small subunit sigma of AP-3 Golgi to vacuole cargo... 0.03 OrthoFinder output from all 47 species
Nbi_g10067 AP19 small subunit sigma of AP-3 Golgi to vacuole cargo... 0.03 OrthoFinder output from all 47 species
Pir_g12753 AP19 small subunit sigma of AP-3 Golgi to vacuole cargo... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g011004 AP19 small subunit sigma of AP-3 Golgi to vacuole cargo... 0.02 OrthoFinder output from all 47 species
Smo446561 AP19 Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 OrthoFinder output from all 47 species
Tin_g24633 AP19 small subunit sigma of AP-3 Golgi to vacuole cargo... 0.09 OrthoFinder output from all 47 species
Zm00001e005895_P003 AP19, Zm00001e005895 small subunit sigma of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP HCCA
MF GO:0004807 triose-phosphate isomerase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005247 voltage-gated chloride channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006821 chloride transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0006897 endocytosis IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0032780 negative regulation of ATP-dependent activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0042030 ATPase inhibitor activity IEP HCCA
BP GO:0043462 regulation of ATP-dependent activity IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR022775 AP_mu_sigma_su 1 140
No external refs found!