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  5. Spa_g12078

Spa_g12078


Description : not classified & original description: none


Gene families : OG0002723 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002723_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g12078
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00095130 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Ala_g10736 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g12617 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07212 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g20655 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene59620.t1 Aspi01Gene59620 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0074.g037460 No alias not classified & original description: CDS=237-1853 0.08 OrthoFinder output from all 47 species
Cba_g13123 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G078400.1 Ceric.02G078400 not classified & original description: pacid=50584041... 0.09 OrthoFinder output from all 47 species
Dac_g08239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g15385 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g05578 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g14093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g16726 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g41602 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_105966g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Pir_g08046 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13525 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13481 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo447288 No alias No description available 0.04 OrthoFinder output from all 47 species
Spa_g56042 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g06909 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11693 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005840 ribosome IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!