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  5. Spa_g10360

Spa_g10360


Description : not classified & original description: none


Gene families : OG0003701 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003701_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g10360

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00067520 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G20180 No alias Protein of unknown function (DUF677) 0.02 OrthoFinder output from all 47 species
AT3G49070 No alias Protein of unknown function (DUF677) 0.02 OrthoFinder output from all 47 species
Als_g28247 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os12g16770.1 LOC_Os12g16770 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc03g025330.4.1 Solyc03g025330 UPF0496 protein At3g49070 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g10361 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006308 DNA catabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007749 DUF677 53 371
No external refs found!