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  5. Spa_g10214

Spa_g10214 (PRA1.B5)


Aliases : PRA1.B5

Description : B-G-class Rab-GDF protein & original description: none


Gene families : OG0000542 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000542_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g10214

Target Alias Description ECC score Gene Family Method Actions
AT1G17700 PRA1.F1 prenylated RAB acceptor 1.F1 0.03 OrthoFinder output from all 47 species
AT1G55640 PRA1.G1 prenylated RAB acceptor 1.G1 0.03 OrthoFinder output from all 47 species
AT4G29658 PRA1.C prenylated RAB acceptor 1.C 0.04 OrthoFinder output from all 47 species
AT5G07110 PRA1.B6 prenylated RAB acceptor 1.B6 0.05 OrthoFinder output from all 47 species
Ala_g17771 PRA1.B5 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05590 PRA1.B1 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00225 PRA1.B5 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01011 PRA1.B1 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G057500.1 PRA1.B4, Ceric.02G057500 B-G-class Rab-GDF protein & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.39G040500.1 PRA1.B2, Ceric.39G040500 B-G-class Rab-GDF protein & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g08868 PRA1.B1 B-G-class Rab-GDF protein & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g01946 PRA1.B1 B-G-class Rab-GDF protein & original description: none 0.04 OrthoFinder output from all 47 species
Gb_20840 PRA1.B2 B-G-class Rab-GDF protein 0.02 OrthoFinder output from all 47 species
Len_g13013 PRA1.B4 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06102 PRA1.B1 B-G-class Rab-GDF protein & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g32287 No alias B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0150.g023344 PRA1.B1 B-G-class Rab-GDF protein & original description: CDS=1-633 0.03 OrthoFinder output from all 47 species
Sam_g11811 No alias B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10215 PRA1.B5 B-G-class Rab-GDF protein & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g15611 PRA1.B2 B-G-class Rab-GDF protein & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g18034 PRA1.B4 B-G-class Rab-GDF protein & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e027291_P001 PRA1.B1, Zm00001e027291 B-G-class Rab-GDF protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR004895 Prenylated_rab_accept_PRA1 42 181
No external refs found!