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Description : not classified & original description: none
Gene families : OG0000686 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000686_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Spa_g10190 | |
| Cluster | HCCA: Cluster_56 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g005238 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g080555 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g098072 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g04038 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g16534 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Als_g07058 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g09408 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g50929 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g57434 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g01520 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g01689 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g05096 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g06488 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.17G001400.1 | Ceric.17G001400 | not classified & original description: pacid=50618654... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g07703 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g16647 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g02578 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g10666 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g22427 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g34074 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g05376 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g09152 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g02754 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g18101 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g02976 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g14022 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g15469 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0010.g004861 | No alias | not classified & original description: CDS=1-531 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0098.g019487 | No alias | not classified & original description: CDS=286-816 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g14321 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g23644 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g03581 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g00222 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g00449 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g02367 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g15694 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006400 | tRNA modification | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008175 | tRNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008176 | tRNA (guanine-N7-)-methyltransferase activity | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | HCCA |
| MF | GO:0031072 | heat shock protein binding | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| CC | GO:0035145 | exon-exon junction complex | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| MF | GO:0051879 | Hsp90 protein binding | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |