Description : heavy chain of clathrin triskelion & original description: none
Gene families : OG0002108 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002108_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Spa_g09457 | |
Cluster | HCCA: Cluster_185 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g011980 | No alias | heavy chain of clathrin triskelion & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g086303 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g20290 | No alias | heavy chain of clathrin triskelion & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g12409 | No alias | heavy chain of clathrin triskelion & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Als_g14456 | No alias | heavy chain of clathrin triskelion & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g27949 | No alias | heavy chain of clathrin triskelion & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000042.11 | No alias | Vesicle trafficking.clathrin coated vesicle (CCV)... | 0.01 | OrthoFinder output from all 47 species | |
LOC_Os11g01380.1 | LOC_Os11g01380 | heavy chain of clathrin triskelion | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os12g01390.1 | LOC_Os12g01390 | heavy chain of clathrin triskelion | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g03514 | No alias | heavy chain of clathrin triskelion & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_47260g0010 | No alias | Clathrin heavy chain 2 OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g03873 | No alias | heavy chain of clathrin triskelion & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g13635 | No alias | heavy chain of clathrin triskelion & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g29284 | No alias | heavy chain of clathrin triskelion & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Sam_g11622 | No alias | heavy chain of clathrin triskelion & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Solyc06g051310.3.1 | Solyc06g051310 | heavy chain of clathrin triskelion | 0.03 | OrthoFinder output from all 47 species | |
Spa_g17793 | No alias | heavy chain of clathrin triskelion & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e009296_P003 | Zm00001e009296 | heavy chain of clathrin triskelion | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e020822_P001 | Zm00001e020822 | heavy chain of clathrin triskelion | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e023940_P002 | Zm00001e023940 | heavy chain of clathrin triskelion | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e039167_P001 | Zm00001e039167 | heavy chain of clathrin triskelion | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006886 | intracellular protein transport | IEA | Interproscan |
BP | GO:0016192 | vesicle-mediated transport | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0005085 | guanyl-nucleotide exchange factor activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
BP | GO:0009966 | regulation of signal transduction | IEP | HCCA |
BP | GO:0010646 | regulation of cell communication | IEP | HCCA |
MF | GO:0019899 | enzyme binding | IEP | HCCA |
BP | GO:0023051 | regulation of signaling | IEP | HCCA |
MF | GO:0030234 | enzyme regulator activity | IEP | HCCA |
MF | GO:0030695 | GTPase regulator activity | IEP | HCCA |
MF | GO:0031267 | small GTPase binding | IEP | HCCA |
BP | GO:0032012 | regulation of ARF protein signal transduction | IEP | HCCA |
BP | GO:0046578 | regulation of Ras protein signal transduction | IEP | HCCA |
BP | GO:0048583 | regulation of response to stimulus | IEP | HCCA |
MF | GO:0051020 | GTPase binding | IEP | HCCA |
BP | GO:0051056 | regulation of small GTPase mediated signal transduction | IEP | HCCA |
MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0098772 | molecular function regulator activity | IEP | HCCA |
MF | GO:0140677 | molecular function activator activity | IEP | HCCA |
MF | GO:0140678 | molecular function inhibitor activity | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
BP | GO:1902531 | regulation of intracellular signal transduction | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR015348 | Clathrin_H-chain_linker_core | 346 | 367 |
IPR000547 | Clathrin_H-chain/VPS_repeat | 850 | 975 |
IPR000547 | Clathrin_H-chain/VPS_repeat | 1292 | 1431 |
IPR000547 | Clathrin_H-chain/VPS_repeat | 993 | 1133 |
IPR000547 | Clathrin_H-chain/VPS_repeat | 1437 | 1579 |
IPR000547 | Clathrin_H-chain/VPS_repeat | 557 | 692 |
IPR000547 | Clathrin_H-chain/VPS_repeat | 701 | 839 |
IPR000547 | Clathrin_H-chain/VPS_repeat | 1144 | 1281 |
IPR022365 | Clathrin_H-chain_propeller_rpt | 156 | 197 |
IPR022365 | Clathrin_H-chain_propeller_rpt | 20 | 55 |
No external refs found! |