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  4. Sequence
  5. Spa_g09068

Spa_g09068


Description : not classified & original description: none


Gene families : OG0000423 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000423_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g09068
Cluster HCCA: Cluster_183

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00041900 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
Aev_g09132 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g01219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12248 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g12711 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06680 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g07263 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07822 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68740 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03849.t1 Aspi01Gene03849 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13921.t1 Aspi01Gene13921 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56074.t1 Aspi01Gene56074 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g31493 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G059900.1 Ceric.01G059900 not classified & original description: pacid=50591226... 0.03 OrthoFinder output from all 47 species
Ceric.02G104700.1 Ceric.02G104700 not classified & original description: pacid=50583816... 0.03 OrthoFinder output from all 47 species
Ceric.03G101500.1 Ceric.03G101500 not classified & original description: pacid=50572752... 0.08 OrthoFinder output from all 47 species
Ceric.07G011400.1 Ceric.07G011400 not classified & original description: pacid=50626447... 0.03 OrthoFinder output from all 47 species
Dac_g00700 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g07576 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g04756 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05776 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01021840001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_16460 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g68140.1 LOC_Os01g68140 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g03809 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g13902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01318 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01720 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12645 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g13797 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_100150g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_16371g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_79411g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g00485 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g08549 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34016 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02046 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g05255 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g36749 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g11204 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06118 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11190 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g25777 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g30034 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001399 No alias not classified & original description: CDS=1-1068 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010178 No alias not classified & original description: CDS=1-714 0.03 OrthoFinder output from all 47 species
Solyc03g112130.1.1 Solyc03g112130 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g01534 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g05002 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e018888_P001 Zm00001e018888 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0005384 manganese ion transmembrane transporter activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006873 cellular monoatomic ion homeostasis IEP HCCA
BP GO:0006875 cellular metal ion homeostasis IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0030003 cellular monoatomic cation homeostasis IEP HCCA
BP GO:0030026 cellular manganese ion homeostasis IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0046916 cellular transition metal ion homeostasis IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
BP GO:0050801 monoatomic ion homeostasis IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0055065 metal ion homeostasis IEP HCCA
BP GO:0055071 manganese ion homeostasis IEP HCCA
BP GO:0055076 transition metal ion homeostasis IEP HCCA
BP GO:0055080 monoatomic cation homeostasis IEP HCCA
BP GO:0055082 cellular chemical homeostasis IEP HCCA
BP GO:0098771 inorganic ion homeostasis IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR008586 DUF868_pln 1 223
No external refs found!