Spa_g08644


Description : not classified & original description: none


Gene families : OG0002169 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002169_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g08644
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
Aev_g44775 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g03127 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g52263 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02589 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g15861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34097.t1 Aspi01Gene34097 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34101.t1 Aspi01Gene34101 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000168 No alias not classified & original description: CDS=137-2176 0.02 OrthoFinder output from all 47 species
Dcu_g19059 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07875 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g62872 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02181 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0025.g009264 No alias not classified & original description: CDS=1-2037 0.02 OrthoFinder output from all 47 species
Sam_g24720 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo439533 No alias No description available 0.02 OrthoFinder output from all 47 species
Tin_g19416 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016849 phosphorus-oxygen lyase activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
CC GO:0031248 protein acetyltransferase complex IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0043189 H4/H2A histone acetyltransferase complex IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
CC GO:1902493 acetyltransferase complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902562 H4 histone acetyltransferase complex IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!