Aliases : PTAC3
Description : cofactor of plastid-encoded RNA polymerase *(PAP1/TAC3) & original description: none
Gene families : OG0004426 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004426_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G04260 | PTAC3 | plastid transcriptionally active 3 | 0.03 | OrthoFinder output from all 47 species | |
Ala_g04595 | PTAC3 | cofactor of plastid-encoded RNA polymerase *(PAP1/TAC3)... | 0.03 | OrthoFinder output from all 47 species | |
MA_86107g0010 | PTAC3 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Mp2g04680.1 | PTAC3 | PAP1/TAC3 cofactor of plastid-encoded RNA polymerase | 0.01 | OrthoFinder output from all 47 species | |
Solyc04g050540.4.1 | PTAC3, Solyc04g050540 | PAP1/TAC3 cofactor of plastid-encoded RNA polymerase | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e004642_P001 | PTAC3, Zm00001e004642 | PAP1/TAC3 cofactor of plastid-encoded RNA polymerase | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000287 | magnesium ion binding | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006166 | purine ribonucleoside salvage | IEP | HCCA |
BP | GO:0006190 | inosine salvage | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | HCCA |
MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
MF | GO:0008252 | nucleotidase activity | IEP | HCCA |
MF | GO:0008253 | 5'-nucleotidase activity | IEP | HCCA |
BP | GO:0009116 | nucleoside metabolic process | IEP | HCCA |
BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
BP | GO:0009119 | ribonucleoside metabolic process | IEP | HCCA |
BP | GO:0009163 | nucleoside biosynthetic process | IEP | HCCA |
CC | GO:0016020 | membrane | IEP | HCCA |
MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
MF | GO:0016791 | phosphatase activity | IEP | HCCA |
BP | GO:0034404 | nucleobase-containing small molecule biosynthetic process | IEP | HCCA |
BP | GO:0042278 | purine nucleoside metabolic process | IEP | HCCA |
BP | GO:0042451 | purine nucleoside biosynthetic process | IEP | HCCA |
BP | GO:0042455 | ribonucleoside biosynthetic process | IEP | HCCA |
MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | HCCA |
BP | GO:0043094 | cellular metabolic compound salvage | IEP | HCCA |
BP | GO:0043101 | purine-containing compound salvage | IEP | HCCA |
MF | GO:0043169 | cation binding | IEP | HCCA |
BP | GO:0043174 | nucleoside salvage | IEP | HCCA |
BP | GO:0044283 | small molecule biosynthetic process | IEP | HCCA |
BP | GO:0046102 | inosine metabolic process | IEP | HCCA |
BP | GO:0046103 | inosine biosynthetic process | IEP | HCCA |
BP | GO:0046128 | purine ribonucleoside metabolic process | IEP | HCCA |
BP | GO:0046129 | purine ribonucleoside biosynthetic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
MF | GO:0046872 | metal ion binding | IEP | HCCA |
MF | GO:0050483 | IMP 5'-nucleotidase activity | IEP | HCCA |
BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901657 | glycosyl compound metabolic process | IEP | HCCA |
BP | GO:1901659 | glycosyl compound biosynthetic process | IEP | HCCA |
No external refs found! |