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  5. Spa_g07788

Spa_g07788 (CKB1)


Aliases : CKB1

Description : regulatory subunit beta of CK-II kinase & original description: none


Gene families : OG0001428 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001428_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g07788

Target Alias Description ECC score Gene Family Method Actions
Adi_g102330 CKB1 regulatory subunit beta of CK-II kinase & original... 0.03 OrthoFinder output from all 47 species
Als_g20689 CKB1 regulatory subunit beta of CK-II kinase & original... 0.03 OrthoFinder output from all 47 species
Aop_g07635 CKB1 regulatory subunit beta of CK-II kinase & original... 0.04 OrthoFinder output from all 47 species
Ceric.05G056400.1 CKB4, Ceric.05G056400 regulatory subunit beta of CK-II kinase & original... 0.03 OrthoFinder output from all 47 species
Ceric.38G040800.1 CKB1, Ceric.38G040800 regulatory subunit beta of CK-II kinase & original... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000670.30 CKB4 Protein modification.phosphorylation.CMGC kinase... 0.01 OrthoFinder output from all 47 species
Dde_g16988 CKB1 regulatory subunit beta of CK-II kinase & original... 0.06 OrthoFinder output from all 47 species
Gb_16891 CKB4 regulatory subunit beta of CK-II kinase 0.02 OrthoFinder output from all 47 species
Len_g14444 CKB1 regulatory subunit beta of CK-II kinase & original... 0.03 OrthoFinder output from all 47 species
Lfl_g22829 CKB1 regulatory subunit beta of CK-II kinase & original... 0.03 OrthoFinder output from all 47 species
MA_10431330g0010 CKB4 regulatory subunit beta of CK-II kinase 0.02 OrthoFinder output from all 47 species
Nbi_g16010 CKB1 regulatory subunit beta of CK-II kinase & original... 0.03 OrthoFinder output from all 47 species
Zm00001e010431_P001 CKB4, Zm00001e010431 regulatory subunit beta of CK-II kinase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005956 protein kinase CK2 complex IEA Interproscan
MF GO:0019887 protein kinase regulator activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
MF GO:0042393 histone binding IEP HCCA
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0097526 spliceosomal tri-snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000704 Casein_kinase_II_reg-sub 158 341
No external refs found!