Spa_g06644


Description : not classified & original description: none


Gene families : OG0001746 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001746_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g06644

Target Alias Description ECC score Gene Family Method Actions
Adi_g012976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g017884 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g055125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g081508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g081788 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05961 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g27229 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12228 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g15976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g11874 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12706 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g40325 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23742 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12083 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g17140.1 LOC_Os03g17140 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Lfl_g30848 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g01666 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g02154 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g43120 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g04316 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16514 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011419 No alias not classified & original description: CDS=1-612 0.05 OrthoFinder output from all 47 species
Tin_g05801 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP HCCA
CC GO:0000445 THO complex part of transcription export complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA

No InterPro domains available for this sequence

No external refs found!