Spa_g06560 (EMB1241)

Aliases : EMB1241

Description : nucleotide exchange factor *(CGE) & original description: none

Gene families : OG0003073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003073_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g06560

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00119p00133730	EMB1241,...	No description available	0.02	OrthoFinder output from all 47 species
AT1G36390	No alias	Co-chaperone GrpE family protein	0.02	OrthoFinder output from all 47 species
AT5G17710	EMB1241	Co-chaperone GrpE family protein	0.06	OrthoFinder output from all 47 species
Adi_g105047	EMB1241	nucleotide exchange factor *(CGE) & original description: none	0.01	OrthoFinder output from all 47 species
Aev_g26465	EMB1241	nucleotide exchange factor *(CGE) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g23855	EMB1241	nucleotide exchange factor *(CGE) & original description: none	0.05	OrthoFinder output from all 47 species
Als_g35613	EMB1241	nucleotide exchange factor *(CGE) & original description: none	0.01	OrthoFinder output from all 47 species
Aop_g29275	EMB1241	nucleotide exchange factor *(CGE) & original description: none	0.03	OrthoFinder output from all 47 species
Cre07.g341600	EMB1241	No description available	0.05	OrthoFinder output from all 47 species
Ehy_g03492	EMB1241	nucleotide exchange factor *(CGE) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01008951001	No alias	No description available	0.03	OrthoFinder output from all 47 species
LOC_Os02g39870.1	EMB1241, LOC_Os02g39870	nucleotide exchange factor (CGE)	0.14	OrthoFinder output from all 47 species
Mp4g18970.1	EMB1241	nucleotide exchange factor (CGE)	0.15	OrthoFinder output from all 47 species
Sacu_v1.1_s0163.g024029	EMB1241	nucleotide exchange factor *(CGE) & original...	0.03	OrthoFinder output from all 47 species
Smo83859	EMB1241	No description available	0.04	OrthoFinder output from all 47 species
Solyc10g081240.3.1	EMB1241, Solyc10g081240	nucleotide exchange factor (CGE)	0.05	OrthoFinder output from all 47 species
Zm00001e008098_P001	Zm00001e008098	nucleotide exchange factor (CGE)	0.06	OrthoFinder output from all 47 species
Zm00001e015084_P001	EMB1241, Zm00001e015084	nucleotide exchange factor (CGE)	0.03	OrthoFinder output from all 47 species
Zm00001e022956_P001	EMB1241, Zm00001e022956	nucleotide exchange factor (CGE)	0.13	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0000774	adenyl-nucleotide exchange factor activity	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0006457	protein folding	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042802	identical protein binding	None	Extended
MF	GO:0042803	protein homodimerization activity	IEA	Interproscan
MF	GO:0046983	protein dimerization activity	None	Extended
MF	GO:0051087	chaperone binding	IEA	Interproscan
MF	GO:0060590	ATPase regulator activity	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000740	GrpE	133	295

External Links

No external refs found!

Spa_g06560 (EMB1241)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation