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  5. Spa_g05580

Spa_g05580


Description : not classified & original description: none


Gene families : OG0007906 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007906_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g05580

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00207160 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Als_g28786 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g38330 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g010616 No alias not classified & original description: CDS=107-796 0.03 OrthoFinder output from all 47 species
Ceric.05G028900.1 Ceric.05G028900 not classified & original description: pacid=50578985... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000093.206 No alias No description available 0.03 OrthoFinder output from all 47 species
Ehy_g05407 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_26129 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g55730.1 LOC_Os03g55730 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Pir_g17842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005796_P001 Zm00001e005796 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR019164 TMEM147 2 161
No external refs found!