Aliases : PTAC2
Description : cofactor of plastid-encoded RNA polymerase *(PAP2/TAC2) & original description: none
Gene families : OG0008467 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008467_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G74850 | PTAC2 | plastid transcriptionally active 2 | 0.06 | OrthoFinder output from all 47 species | |
Adi_g067227 | SVR7 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g08004 | PTAC2 | cofactor of plastid-encoded RNA polymerase *(PAP2/TAC2)... | 0.03 | OrthoFinder output from all 47 species | |
Als_g01158 | PTAC2 | cofactor of plastid-encoded RNA polymerase *(PAP2/TAC2)... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g08821 | PTAC2 | cofactor of plastid-encoded RNA polymerase *(PAP2/TAC2)... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.39G041000.1 | PTAC2, Ceric.39G041000 | cofactor of plastid-encoded RNA polymerase *(PAP2/TAC2)... | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g06808 | PTAC2 | cofactor of plastid-encoded RNA polymerase *(PAP2/TAC2)... | 0.04 | OrthoFinder output from all 47 species | |
Pir_g12225 | PTAC2 | cofactor of plastid-encoded RNA polymerase *(PAP2/TAC2)... | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0004109 | coproporphyrinogen oxidase activity | IEP | HCCA |
MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
MF | GO:0005261 | monoatomic cation channel activity | IEP | HCCA |
BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0006457 | protein folding | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006754 | ATP biosynthetic process | IEP | HCCA |
BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | HCCA |
BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
MF | GO:0015078 | proton transmembrane transporter activity | IEP | HCCA |
MF | GO:0015252 | proton channel activity | IEP | HCCA |
MF | GO:0015267 | channel activity | IEP | HCCA |
BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | HCCA |
MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | HCCA |
MF | GO:0016634 | oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor | IEP | HCCA |
MF | GO:0016874 | ligase activity | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
BP | GO:0033013 | tetrapyrrole metabolic process | IEP | HCCA |
BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | HCCA |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
MF | GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism | IEP | HCCA |
BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 467 | 514 |
IPR002885 | Pentatricopeptide_repeat | 537 | 584 |
IPR002885 | Pentatricopeptide_repeat | 264 | 285 |
IPR002885 | Pentatricopeptide_repeat | 751 | 779 |
IPR002885 | Pentatricopeptide_repeat | 719 | 744 |
IPR002885 | Pentatricopeptide_repeat | 315 | 374 |
IPR002885 | Pentatricopeptide_repeat | 810 | 854 |
IPR002885 | Pentatricopeptide_repeat | 386 | 446 |
IPR002885 | Pentatricopeptide_repeat | 641 | 691 |
No external refs found! |