1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g04834

Spa_g04834


Description : not classified & original description: none


Gene families : OG0006387 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006387_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g04834

Target Alias Description ECC score Gene Family Method Actions
AT5G19940 No alias Plastid-lipid associated protein PAP / fibrillin family protein 0.03 OrthoFinder output from all 47 species
Aob_g17679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G046500.1 Ceric.07G046500 not classified & original description: pacid=50628104... 0.05 OrthoFinder output from all 47 species
Cre12.g502250 No alias Probable plastid-lipid-associated protein 8,... 0.02 OrthoFinder output from all 47 species
Ehy_g11045 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01035544001 No alias Probable plastid-lipid-associated protein 8,... 0.06 OrthoFinder output from all 47 species
Gb_00384 No alias Probable plastid-lipid-associated protein 8,... 0.07 OrthoFinder output from all 47 species
LOC_Os04g51792.1 LOC_Os04g51792 Probable plastid-lipid-associated protein 8,... 0.03 OrthoFinder output from all 47 species
MA_10436223g0010 No alias Probable plastid-lipid-associated protein 8,... 0.03 OrthoFinder output from all 47 species
Mp2g06660.1 No alias Probable plastid-lipid-associated protein 8,... 0.03 OrthoFinder output from all 47 species
Ore_g05325 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g00612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004054 No alias not classified & original description: CDS=1-759 0.03 OrthoFinder output from all 47 species
Tin_g10411 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e007005_P001 Zm00001e007005 Probable plastid-lipid-associated protein 8,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR006843 PAP/fibrillin_dom 109 239
No external refs found!