Spa_g04692


Description : regulatory protein *(SCAMP) of exocytic trafficking & original description: none


Gene families : OG0001155 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001155_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g04692

Target Alias Description ECC score Gene Family Method Actions
AT1G11180 No alias Secretory carrier membrane protein (SCAMP) family protein 0.02 OrthoFinder output from all 47 species
Ala_g01553 No alias regulatory protein *(SCAMP) of exocytic trafficking &... 0.04 OrthoFinder output from all 47 species
Als_g08101 No alias regulatory protein *(SCAMP) of exocytic trafficking &... 0.03 OrthoFinder output from all 47 species
Aob_g01403 No alias regulatory protein *(SCAMP) of exocytic trafficking &... 0.02 OrthoFinder output from all 47 species
Dac_g11178 SC3 regulatory protein *(SCAMP) of exocytic trafficking &... 0.04 OrthoFinder output from all 47 species
Dcu_g02657 No alias regulatory protein *(SCAMP) of exocytic trafficking &... 0.03 OrthoFinder output from all 47 species
GSVIVT01030566001 No alias Secretory carrier-associated membrane protein 1... 0.03 OrthoFinder output from all 47 species
LOC_Os02g47010.1 LOC_Os02g47010 Secretory carrier-associated membrane protein 5 OS=Oryza... 0.03 OrthoFinder output from all 47 species
LOC_Os05g42330.1 LOC_Os05g42330 Secretory carrier-associated membrane protein 3 OS=Oryza... 0.03 OrthoFinder output from all 47 species
Mp2g20380.1 SC3 Putative secretory carrier-associated membrane protein 1... 0.03 OrthoFinder output from all 47 species
Nbi_g02980 No alias regulatory protein *(SCAMP) of exocytic trafficking &... 0.04 OrthoFinder output from all 47 species
Nbi_g05251 No alias regulatory protein *(SCAMP) of exocytic trafficking &... 0.05 OrthoFinder output from all 47 species
Pir_g12817 No alias regulatory protein *(SCAMP) of exocytic trafficking &... 0.04 OrthoFinder output from all 47 species
Ppi_g15914 No alias regulatory protein *(SCAMP) of exocytic trafficking &... 0.03 OrthoFinder output from all 47 species
Smo141352 No alias Secretory carrier-associated membrane protein 1 OS=Oryza... 0.03 OrthoFinder output from all 47 species
Solyc07g054490.3.1 Solyc07g054490 Secretory carrier-associated membrane protein 3... 0.04 OrthoFinder output from all 47 species
Tin_g00682 No alias regulatory protein *(SCAMP) of exocytic trafficking &... 0.03 OrthoFinder output from all 47 species
Zm00001e010563_P001 Zm00001e010563 Secretory carrier-associated membrane protein 1 OS=Oryza... 0.02 OrthoFinder output from all 47 species
Zm00001e012486_P001 SC3, Zm00001e012486 Secretory carrier-associated membrane protein 4 OS=Oryza... 0.02 OrthoFinder output from all 47 species
Zm00001e015529_P002 Zm00001e015529 Secretory carrier-associated membrane protein 6 OS=Oryza... 0.05 OrthoFinder output from all 47 species
Zm00001e035266_P003 Zm00001e035266 Secretory carrier-associated membrane protein 1 OS=Oryza... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015031 protein transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0000976 transcription cis-regulatory region binding IEP HCCA
MF GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding IEP HCCA
MF GO:0001067 transcription regulatory region nucleic acid binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0004743 pyruvate kinase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0030955 potassium ion binding IEP HCCA
MF GO:0031420 alkali metal ion binding IEP HCCA
MF GO:0032422 purine-rich negative regulatory element binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0070006 metalloaminopeptidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:1990837 sequence-specific double-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR007273 SCAMP 99 271
No external refs found!