1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g04531

Spa_g04531


Description : not classified & original description: none


Gene families : OG0001514 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001514_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g04531

Target Alias Description ECC score Gene Family Method Actions
AT3G58520 No alias Ubiquitin carboxyl-terminal hydrolase family protein 0.05 OrthoFinder output from all 47 species
Adi_g088467 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g07070 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11058 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g13696 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18610 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g25571 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g00927 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g01052 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g03816 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.16G075200.1 RPD1, Ceric.16G075200 not classified & original description: pacid=50589258... 0.03 OrthoFinder output from all 47 species
Dac_g00875 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g02184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g29304 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_04492 No alias WTF9 mitochondrial RNA splicing factor 0.04 OrthoFinder output from all 47 species
Len_g58602 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05427 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g06839 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g02163 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09504 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07478 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53712 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005187 No alias not classified & original description: CDS=1-1266 0.03 OrthoFinder output from all 47 species
Spa_g22170 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g31693 RPD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006573_P002 Zm00001e006573 Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e014695_P001 Zm00001e014695 no description available(sp|q9zuz6|wtf9_arath : 128.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003847 1-alkyl-2-acetylglycerophosphocholine esterase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR021099 PORR_domain 60 394
No external refs found!