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  5. Spa_g04434

Spa_g04434


Description : substrate adaptor *(OZS3) of CUL4-DDB1 E3 ubiquitin ligase complex & original description: none


Gene families : OG0006328 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006328_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g04434

Target Alias Description ECC score Gene Family Method Actions
AT2G20330 No alias Transducin/WD40 repeat-like superfamily protein 0.02 OrthoFinder output from all 47 species
Als_g03819 No alias substrate adaptor *(OZS3) of CUL4-DDB1 E3 ubiquitin... 0.04 OrthoFinder output from all 47 species
Aop_g06382 No alias substrate adaptor *(OZS3) of CUL4-DDB1 E3 ubiquitin... 0.04 OrthoFinder output from all 47 species
Azfi_s0143.g051480 No alias substrate adaptor *(OZS3) of CUL4-DDB1 E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000704.40 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre04.g217750 No alias No description available 0.01 OrthoFinder output from all 47 species
LOC_Os10g32710.1 LOC_Os10g32710 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g16145 No alias substrate adaptor *(OZS3) of CUL4-DDB1 E3 ubiquitin... 0.05 OrthoFinder output from all 47 species
Pnu_g25607 No alias substrate adaptor *(OZS3) of CUL4-DDB1 E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Ppi_g01181 No alias substrate adaptor *(OZS3) of CUL4-DDB1 E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0093.g019016 No alias substrate adaptor *(OZS3) of CUL4-DDB1 E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Zm00001e012730_P002 Zm00001e012730 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004594 pantothenate kinase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0015936 coenzyme A metabolic process IEP HCCA
BP GO:0015937 coenzyme A biosynthetic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 297 332
IPR001680 WD40_repeat 196 230
No external refs found!