Aliases : DDB1A
Description : core adaptor component *(DDB1) of CUL4-based E3 ubiquitin ligase complexes & original description: none
Gene families : OG0004030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004030_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT4G05420 | DDB1A | damaged DNA binding protein 1A | 0.03 | OrthoFinder output from all 47 species | |
Adi_g015691 | DDB1A | core adaptor component *(DDB1) of CUL4-based E3... | 0.02 | OrthoFinder output from all 47 species | |
Aop_g09805 | DDB1A | core adaptor component *(DDB1) of CUL4-based E3... | 0.03 | OrthoFinder output from all 47 species | |
Cre10.g432000 | DDB1A | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g08979 | DDB1A | core adaptor component *(DDB1) of CUL4-based E3... | 0.04 | OrthoFinder output from all 47 species | |
Dde_g02981 | DDB1A | core adaptor component *(DDB1) of CUL4-based E3... | 0.02 | OrthoFinder output from all 47 species | |
Gb_36569 | DDB1A | component DDB1 of UV-damaged DNA-binding protein... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os05g51480.1 | DDB1A, LOC_Os05g51480 | component DDB1 of UV-damaged DNA-binding protein... | 0.02 | OrthoFinder output from all 47 species | |
MA_41156g0010 | DDB1A | component DDB1 of UV-damaged DNA-binding protein... | 0.06 | OrthoFinder output from all 47 species | |
Pir_g18367 | DDB1A | core adaptor component *(DDB1) of CUL4-based E3... | 0.03 | OrthoFinder output from all 47 species | |
Smo145521 | DDB1A | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g021650.3.1 | DDB1A, Solyc02g021650 | component DDB1 of UV-damaged DNA-binding protein... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e032569_P002 | DDB1A, Zm00001e032569 | component DDB1 of UV-damaged DNA-binding protein... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
CC | GO:0005634 | nucleus | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | HCCA |
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003724 | RNA helicase activity | IEP | HCCA |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
MF | GO:0004386 | helicase activity | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
CC | GO:0005737 | cytoplasm | IEP | HCCA |
BP | GO:0006401 | RNA catabolic process | IEP | HCCA |
BP | GO:0006402 | mRNA catabolic process | IEP | HCCA |
MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
MF | GO:0008186 | ATP-dependent activity, acting on RNA | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
BP | GO:0010921 | regulation of phosphatase activity | IEP | HCCA |
MF | GO:0015631 | tubulin binding | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
BP | GO:0019220 | regulation of phosphate metabolic process | IEP | HCCA |
BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
MF | GO:0019899 | enzyme binding | IEP | HCCA |
MF | GO:0019902 | phosphatase binding | IEP | HCCA |
MF | GO:0019903 | protein phosphatase binding | IEP | HCCA |
CC | GO:0031011 | Ino80 complex | IEP | HCCA |
BP | GO:0031399 | regulation of protein modification process | IEP | HCCA |
BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
BP | GO:0035303 | regulation of dephosphorylation | IEP | HCCA |
BP | GO:0035304 | regulation of protein dephosphorylation | IEP | HCCA |
MF | GO:0043015 | gamma-tubulin binding | IEP | HCCA |
BP | GO:0043666 | regulation of phosphoprotein phosphatase activity | IEP | HCCA |
BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
BP | GO:0050789 | regulation of biological process | IEP | HCCA |
BP | GO:0050790 | regulation of catalytic activity | IEP | HCCA |
BP | GO:0051174 | regulation of phosphorus metabolic process | IEP | HCCA |
BP | GO:0051246 | regulation of protein metabolic process | IEP | HCCA |
BP | GO:0051336 | regulation of hydrolase activity | IEP | HCCA |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0065007 | biological regulation | IEP | HCCA |
BP | GO:0065009 | regulation of molecular function | IEP | HCCA |
CC | GO:0070603 | SWI/SNF superfamily-type complex | IEP | HCCA |
CC | GO:0097346 | INO80-type complex | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
CC | GO:1904949 | ATPase complex | IEP | HCCA |
No external refs found! |