Pp3c13_4720V3.1


Description : auxin response factor 6


Gene families : OG_01_0000080 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000080_tree ,
OG_02_0000516 (LandPlants) Phylogenetic Tree(s): OG_02_0000516_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c13_4720V3.1
Cluster HCCA: Cluster_220

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Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00168950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3... 0.02 Archaeplastida
AMTR_s00021p00200760 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3...0.02 Archaeplastida
AMTR_s00021p00221770 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3... 0.03 Archaeplastida
AMTR_s00029p00157690 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3... 0.03 Archaeplastida
AT1G59750 ARF1 auxin response factor 1 0.04 Archaeplastida
AT2G46530 ARF11 auxin response factor 11 0.03 Archaeplastida
AT5G20730 TIR5, MSG1,... Transcriptional factor B3 family protein /... 0.02 Archaeplastida
AT5G37020 ARF8, ATARF8 auxin response factor 8 0.04 Archaeplastida
GSVIVT01019566001 No alias RNA biosynthesis.transcriptional activation.B3... 0.02 Archaeplastida
GSVIVT01021128001 No alias RNA biosynthesis.transcriptional activation.B3... 0.03 Archaeplastida
GSVIVT01021552001 No alias RNA biosynthesis.transcriptional activation.B3... 0.03 Archaeplastida
GSVIVT01021553001 No alias RNA biosynthesis.transcriptional activation.B3... 0.01 Archaeplastida
GSVIVT01025159001 No alias RNA biosynthesis.transcriptional activation.B3... 0.03 Archaeplastida
GSVIVT01027166001 No alias RNA biosynthesis.transcriptional activation.B3... 0.02 Archaeplastida
GSVIVT01032251001 No alias RNA biosynthesis.transcriptional activation.B3... 0.02 Archaeplastida
GSVIVT01035204001 No alias RNA biosynthesis.transcriptional activation.B3... 0.02 Archaeplastida
GSVIVT01035205001 No alias Auxin response factor 12 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
Gb_23186 No alias transcription factor (ARF) 0.03 Archaeplastida
Gb_31132 No alias transcription factor (ARF) 0.02 Archaeplastida
Gb_39685 No alias transcription factor (ARF) 0.04 Archaeplastida
Gb_39686 No alias transcription factor (ARF) 0.03 Archaeplastida
LOC_Os01g48060.1 No alias transcription factor (ARF) 0.02 Archaeplastida
LOC_Os01g70270.1 No alias transcription factor (ARF) 0.01 Archaeplastida
LOC_Os04g56850.1 No alias transcription factor (ARF) 0.03 Archaeplastida
LOC_Os05g48870.1 No alias transcription factor (ARF) 0.01 Archaeplastida
LOC_Os06g46410.1 No alias transcription factor (ARF) 0.02 Archaeplastida
LOC_Os11g32110.1 No alias transcription factor (ARF) 0.02 Archaeplastida
LOC_Os12g41950.1 No alias transcription factor (ARF) 0.02 Archaeplastida
MA_10432528g0010 No alias transcription factor (ARF) 0.02 Archaeplastida
MA_10432580g0010 No alias transcription factor (ARF) 0.03 Archaeplastida
MA_85955g0010 No alias transcription factor (ARF) 0.02 Archaeplastida
Mp1g12750.1 No alias transcription factor (ARF) 0.04 Archaeplastida
Mp2g02890.1 No alias Auxin response factor 19 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Pp3c14_16990V3.1 No alias auxin response factor 6 0.03 Archaeplastida
Pp3c17_19900V3.1 No alias auxin response factor 6 0.02 Archaeplastida
Smo438333 No alias Auxin response factor 11 OS=Oryza sativa subsp. indica 0.04 Archaeplastida
Solyc01g096070.3.1 No alias transcription factor (ARF) 0.01 Archaeplastida
Solyc02g037530.3.1 No alias transcription factor (ARF) 0.02 Archaeplastida
Solyc03g118290.3.1 No alias transcription factor (ARF) 0.02 Archaeplastida
Solyc05g056040.3.1 No alias transcription factor (ARF) 0.02 Archaeplastida
Solyc06g075150.3.1 No alias transcription factor (ARF) 0.01 Archaeplastida
Solyc07g042260.4.1 No alias transcription factor (ARF) 0.02 Archaeplastida
Solyc08g082630.3.1 No alias transcription factor (ARF) 0.01 Archaeplastida
Solyc09g007810.4.1 No alias transcription factor (ARF) 0.01 Archaeplastida
Solyc11g069190.2.1 No alias transcription factor (ARF) 0.04 Archaeplastida
Zm00001e003229_P002 No alias transcription factor (ARF) 0.05 Archaeplastida
Zm00001e006577_P003 No alias transcription factor (ARF) 0.07 Archaeplastida
Zm00001e006640_P002 No alias transcription factor (ARF) 0.02 Archaeplastida
Zm00001e013191_P001 No alias transcription factor (ARF) 0.02 Archaeplastida
Zm00001e014833_P002 No alias transcription factor (ARF) 0.03 Archaeplastida
Zm00001e018126_P002 No alias transcription factor (ARF) 0.09 Archaeplastida
Zm00001e020205_P004 No alias transcription factor (ARF) 0.04 Archaeplastida
Zm00001e030325_P003 No alias transcription factor (ARF) 0.02 Archaeplastida
Zm00001e032135_P002 No alias transcription factor (ARF) 0.02 Archaeplastida
Zm00001e032423_P002 No alias transcription factor (ARF) 0.02 Archaeplastida
Zm00001e036249_P003 No alias transcription factor (ARF) 0.01 Archaeplastida
Zm00001e041866_P001 No alias transcription factor (ARF) 0.02 Archaeplastida
Zm00001e041910_P003 No alias transcription factor (ARF) 0.07 Archaeplastida
AMTR_s00029p00157690 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3... 0.03 LandPlants
AT1G30330 ARF6 auxin response factor 6 0.01 LandPlants
AT5G37020 ARF8, ATARF8 auxin response factor 8 0.03 LandPlants
GSVIVT01021553001 No alias RNA biosynthesis.transcriptional activation.B3... 0.01 LandPlants
GSVIVT01035204001 No alias RNA biosynthesis.transcriptional activation.B3... 0.02 LandPlants
Gb_39685 No alias transcription factor (ARF) 0.03 LandPlants
LOC_Os04g56850.1 No alias transcription factor (ARF) 0.03 LandPlants
LOC_Os04g57610.1 No alias transcription factor (ARF) 0.01 LandPlants
LOC_Os06g46410.1 No alias transcription factor (ARF) 0.02 LandPlants
Mp1g12750.1 No alias transcription factor (ARF) 0.04 LandPlants
Pp3c14_16990V3.1 No alias auxin response factor 6 0.03 LandPlants
Solyc02g037530.3.1 No alias transcription factor (ARF) 0.02 LandPlants
Solyc03g031970.4.1 No alias transcription factor (ARF) 0.01 LandPlants
Zm00001e003229_P002 No alias transcription factor (ARF) 0.04 LandPlants
Zm00001e006577_P003 No alias transcription factor (ARF) 0.05 LandPlants
Zm00001e006640_P002 No alias transcription factor (ARF) 0.02 LandPlants
Zm00001e018126_P002 No alias transcription factor (ARF) 0.08 LandPlants
Zm00001e030325_P003 No alias transcription factor (ARF) 0.02 LandPlants
Zm00001e036249_P003 No alias transcription factor (ARF) 0.01 LandPlants
Zm00001e041910_P003 No alias transcription factor (ARF) 0.05 LandPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!