1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g01508

Spa_g01508


Description : not classified & original description: none


Gene families : OG0002130 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002130_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g01508
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Cba_g14458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G034500.1 Ceric.06G034500 not classified & original description: pacid=50620313... 0.03 OrthoFinder output from all 47 species
GSVIVT01016123001 No alias No description available 0.03 OrthoFinder output from all 47 species
Ore_g44404 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g09144 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02691 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g03917 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000381 regulation of alternative mRNA splicing, via spliceosome IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016556 mRNA modification IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0043484 regulation of RNA splicing IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP HCCA
BP GO:0050684 regulation of mRNA processing IEP HCCA
BP GO:0080009 mRNA methylation IEP HCCA
BP GO:1903311 regulation of mRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 208 269
No external refs found!