Ore_g43250 (RPL2.1)

Aliases : RPL2.1

Description : component *(uL2c) of large plastid ribosomal-subunit proteome & original description: none

Gene families : OG0002194 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002194_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ore_g43250
Cluster	HCCA: Cluster_7

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00543p00002030	RPL2.1,...	50S ribosomal protein L2, chloroplastic OS=Solanum lycopersicum	0.05	OrthoFinder output from all 47 species
ATCG00830	RPL2.1	ribosomal protein L2	0.26	OrthoFinder output from all 47 species
ATCG01310	RPL2.2	ribosomal protein L2	0.26	OrthoFinder output from all 47 species
Aev_g14432	RPL2.1	component *(uL2c) of large plastid ribosomal-subunit...	0.29	OrthoFinder output from all 47 species
Aev_g24286	No alias	component *(uL2m) of large mitoribosomal-subunit...	0.23	OrthoFinder output from all 47 species
Ala_g18429	RPL2.1	component *(uL2c) of large plastid ribosomal-subunit...	0.08	OrthoFinder output from all 47 species
Ala_g38158	No alias	component *(uL2m) of large mitoribosomal-subunit...	0.09	OrthoFinder output from all 47 species
Als_g02244	RPL2.1	component *(uL2c) of large plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Als_g02447	No alias	component *(uL2m) of large mitoribosomal-subunit...	0.08	OrthoFinder output from all 47 species
Aob_g13898	RPL2.1	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aop_g61267	No alias	component *(uL2m) of large mitoribosomal-subunit...	0.12	OrthoFinder output from all 47 species
Cba_g03784	No alias	component *(uL2m) of large mitoribosomal-subunit...	0.11	OrthoFinder output from all 47 species
Cba_g04596	RPL2.1	component *(uL2c) of large plastid ribosomal-subunit...	0.07	OrthoFinder output from all 47 species
Ceric.05G042700.1	RPL2.1, Ceric.05G042700	not classified & original description: pacid=50577724...	0.13	OrthoFinder output from all 47 species
Ceric.05G048500.1	RPL2.1, Ceric.05G048500	component *(uL2c) of large plastid ribosomal-subunit...	0.13	OrthoFinder output from all 47 species
Ceric.07G017400.1	RPL2.1, Ceric.07G017400	not classified & original description: pacid=50626616...	0.17	OrthoFinder output from all 47 species
Ceric.1Z020200.1	RPL2.1, Ceric.1Z020200	not classified & original description: pacid=50586367...	0.09	OrthoFinder output from all 47 species
Ceric.1Z164200.1	RPL2.1, Ceric.1Z164200	not classified & original description: pacid=50596959...	0.15	OrthoFinder output from all 47 species
Ceric.1Z191300.1	Ceric.1Z191300	not classified & original description: pacid=50606328...	0.03	OrthoFinder output from all 47 species
Ceric.23G029300.1	Ceric.23G029300	not classified & original description: pacid=50611505...	0.06	OrthoFinder output from all 47 species
Ceric.25G023800.1	Ceric.25G023800	not classified & original description: pacid=50593099...	0.05	OrthoFinder output from all 47 species
Ceric.38G009500.1	RPL2.1, Ceric.38G009500	not classified & original description: pacid=50580350...	0.11	OrthoFinder output from all 47 species
Ceric.38G057600.1	Ceric.38G057600	not classified & original description: pacid=50579815...	0.16	OrthoFinder output from all 47 species
Cre07.g348850	RPL2.1	50S ribosomal protein L2, chloroplastic OS=Chara vulgaris	0.03	OrthoFinder output from all 47 species
Dcu_g49833	RPL2.1	component *(uL2c) of large plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Dde_g06655	RPL2.1	component *(uL2c) of large plastid ribosomal-subunit...	0.09	OrthoFinder output from all 47 species
Dde_g21793	RPL2	not classified & original description: none	0.06	OrthoFinder output from all 47 species
GSVIVT01023979001	No alias	No description available	0.03	OrthoFinder output from all 47 species
Gb_17475	RPL2.1	50S ribosomal protein L2, chloroplastic OS=Cycas...	0.06	OrthoFinder output from all 47 species
Gb_20139	RPL2.1	component psRPS11 of small ribosomal subunit proteome	0.04	OrthoFinder output from all 47 species
Gb_24024	RPL2.1	50S ribosomal protein L2, chloroplastic OS=Cycas...	0.06	OrthoFinder output from all 47 species
Gb_25047	RPL2.1	50S ribosomal protein L2, chloroplastic OS=Cycas...	0.06	OrthoFinder output from all 47 species
Gb_37512	RPL2.1	50S ribosomal protein L2, chloroplastic OS=Cycas...	0.04	OrthoFinder output from all 47 species
Lfl_g13189	RPL2.1	component *(uL2c) of large plastid ribosomal-subunit...	0.12	OrthoFinder output from all 47 species
Lfl_g32423	No alias	component *(uL2m) of large mitoribosomal-subunit...	0.02	OrthoFinder output from all 47 species
MA_7814449g0010	No alias	60S ribosomal protein L2, mitochondrial OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
Mp1g19370.1	No alias	no hits & (original description: none)	0.15	OrthoFinder output from all 47 species
Nbi_g04996	RPL2.1	component *(uL2c) of large plastid ribosomal-subunit...	0.12	OrthoFinder output from all 47 species
Nbi_g39693	No alias	component *(uL2m) of large mitoribosomal-subunit...	0.08	OrthoFinder output from all 47 species
Pir_g37334	No alias	component *(uL2m) of large mitoribosomal-subunit...	0.14	OrthoFinder output from all 47 species
Pp3c2_23491V3.1	Pp3c2_23491	Ribosomal protein L2 family	0.02	OrthoFinder output from all 47 species
Sam_g03873	No alias	component *(uL2m) of large mitoribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Smo137825	RPL2.1	Protein biosynthesis.organelle translation...	0.2	OrthoFinder output from all 47 species
Solyc00g500035.1.1	RPL2.1, Solyc00g500035	50S ribosomal protein L2, chloroplastic OS=Nicotiana...	0.07	OrthoFinder output from all 47 species
Solyc00g500036.1.1	RPL2.1, Solyc00g500036	50S ribosomal protein L2, chloroplastic OS=Nicotiana...	0.06	OrthoFinder output from all 47 species
Solyc00g500047.1.1	RPL2.1, Solyc00g500047	50S ribosomal protein L2, chloroplastic OS=Solanum...	0.04	OrthoFinder output from all 47 species
Solyc00g500079.1.1	RPL2.1, Solyc00g500079	50S ribosomal protein L2, chloroplastic OS=Nicotiana...	0.07	OrthoFinder output from all 47 species
Solyc00g500080.1.1	RPL2.1, Solyc00g500080	50S ribosomal protein L2, chloroplastic OS=Nicotiana...	0.06	OrthoFinder output from all 47 species
Solyc00g500297.1.1	RPL2.1, Solyc00g500297	50S ribosomal protein L2, chloroplastic OS=Nicotiana...	0.07	OrthoFinder output from all 47 species
Solyc00g500298.1.1	RPL2.1, Solyc00g500298	50S ribosomal protein L2, chloroplastic OS=Nicotiana...	0.06	OrthoFinder output from all 47 species
Solyc02g150102.1.1	RPL2.1, Solyc02g150102	50S ribosomal protein L2, chloroplastic OS=Aethionema...	0.04	OrthoFinder output from all 47 species
Solyc09g050067.1.1	RPL2.1, Solyc09g050067	50S ribosomal protein L2, chloroplastic OS=Nicotiana...	0.02	OrthoFinder output from all 47 species
Solyc09g050068.1.1	RPL2.1, Solyc09g050068	50S ribosomal protein L2, chloroplastic OS=Solanum...	0.04	OrthoFinder output from all 47 species
Solyc10g012217.1.1	RPL2.1, Solyc10g012217	50S ribosomal protein L2, chloroplastic OS=Nicotiana...	0.02	OrthoFinder output from all 47 species
Spa_g56424	RPL2	component *(uL2m) of large mitoribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Zm00001e036845_P001	RPL2.1, Zm00001e036845	50S ribosomal protein L2, chloroplastic OS=Sorghum...	0.02	OrthoFinder output from all 47 species
Zm00001e042370_P001	RPL2.1, Zm00001e042370	50S ribosomal protein L2, chloroplastic OS=Sorghum...	0.02	OrthoFinder output from all 47 species
Zm00001e042445_P001	RPL2.1, Zm00001e042445	50S ribosomal protein L2, chloroplastic OS=Sorghum...	0.02	OrthoFinder output from all 47 species
Zm00001e042446_P001	RPL2.1, Zm00001e042446	50S ribosomal protein L2, chloroplastic OS=Sorghum...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0003954	NADH dehydrogenase activity	IEP	HCCA
MF	GO:0003955	NAD(P)H dehydrogenase (quinone) activity	IEP	HCCA
MF	GO:0005215	transporter activity	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006163	purine nucleotide metabolic process	IEP	HCCA
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
BP	GO:0006754	ATP biosynthetic process	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
MF	GO:0008137	NADH dehydrogenase (ubiquinone) activity	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009142	nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009259	ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009579	thylakoid	IEP	HCCA
BP	GO:0009767	photosynthetic electron transport chain	IEP	HCCA
BP	GO:0009772	photosynthetic electron transport in photosystem II	IEP	HCCA
MF	GO:0015078	proton transmembrane transporter activity	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
MF	GO:0015453	oxidoreduction-driven active transmembrane transporter activity	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
BP	GO:0015986	proton motive force-driven ATP synthesis	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0016168	chlorophyll binding	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	HCCA
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
BP	GO:0019637	organophosphate metabolic process	IEP	HCCA
BP	GO:0019684	photosynthesis, light reaction	IEP	HCCA
BP	GO:0019693	ribose phosphate metabolic process	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	HCCA
BP	GO:0022900	electron transport chain	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	HCCA
CC	GO:0034357	photosynthetic membrane	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
CC	GO:0042651	thylakoid membrane	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
MF	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	IEP	HCCA
CC	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
MF	GO:0046906	tetrapyrrole binding	IEP	HCCA
MF	GO:0048038	quinone binding	IEP	HCCA
MF	GO:0050136	NADH dehydrogenase (quinone) activity	IEP	HCCA
MF	GO:0051287	NAD binding	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
BP	GO:0072521	purine-containing compound metabolic process	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR022666	Rbsml_prot_L2_RNA-bd_dom	42	118
IPR022669	Ribosomal_L2_C	126	251

External Links

No external refs found!

Ore_g43250 (RPL2.1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation