1. Home
  2. Species
  3. Ophioglossum reticulatum
  4. Sequence
  5. Ore_g43157

Ore_g43157 (OSU1, QUA2, TSD2)


Aliases : OSU1, QUA2, TSD2

Description : not classified & original description: none


Gene families : OG0002602 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002602_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g43157
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Adi_g110589 OSU1, QUA2, TSD2 pectin methyltransferase *(QUA2) involved in... 0.04 OrthoFinder output from all 47 species
Aev_g28759 OSU1, QUA2, TSD2 pectin methyltransferase *(QUA2) involved in... 0.03 OrthoFinder output from all 47 species
Aop_g29423 QUL2 pectin methyltransferase *(QUA2) involved in... 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000189 OSU1, QUA2, TSD2 pectin methyltransferase *(QUA2) involved in... 0.02 OrthoFinder output from all 47 species
Ceric.18G036700.1 OSU1, QUA2,... pectin methyltransferase *(QUA2) involved in... 0.04 OrthoFinder output from all 47 species
Dac_g07135 OSU1, QUA2, TSD2 pectin methyltransferase *(QUA2) involved in... 0.07 OrthoFinder output from all 47 species
Dac_g21143 QUL1 pectin methyltransferase *(QUA2) involved in... 0.04 OrthoFinder output from all 47 species
Dcu_g01897 OSU1, QUA2, TSD2 pectin methyltransferase *(QUA2) involved in... 0.03 OrthoFinder output from all 47 species
Dde_g09841 OSU1, QUA2, TSD2 pectin methyltransferase *(QUA2) involved in... 0.02 OrthoFinder output from all 47 species
Ehy_g06931 OSU1, QUA2, TSD2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g08663 OSU1, QUA2, TSD2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09731 OSU1, QUA2, TSD2 pectin methyltransferase *(QUA2) involved in... 0.02 OrthoFinder output from all 47 species
Pir_g14957 QUL1 pectin methyltransferase *(QUA2) involved in... 0.02 OrthoFinder output from all 47 species
Smo426562 OSU1, QUA2, TSD2 Probable pectin methyltransferase QUA2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc04g074290.3.1 OSU1, QUA2,... Probable pectin methyltransferase QUA2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g16410 QUL2 pectin methyltransferase *(QUA2) involved in... 0.03 OrthoFinder output from all 47 species
Spa_g35017 OSU1, QUA2, TSD2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e015888_P001 OSU1, QUA2,... Probable pectin methyltransferase QUA2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e023857_P001 OSU1, QUA2,... Probable pectin methyltransferase QUA2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR004159 Put_SAM_MeTrfase 147 673
No external refs found!