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  5. Ore_g38200

Ore_g38200 (GRV2, KAM2)


Aliases : GRV2, KAM2

Description : vacuolar protein sorting co-chaperone *(GRV2) & original description: none


Gene families : OG0003197 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003197_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g38200

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00152000 GRV2, KAM2,... DnaJ homolog subfamily C GRV2 OS=Arabidopsis thaliana 0.09 OrthoFinder output from all 47 species
AT2G26890 GRV2, KAM2 DNAJ heat shock N-terminal domain-containing protein 0.12 OrthoFinder output from all 47 species
Adi_g060491 GRV2, KAM2 vacuolar protein sorting co-chaperone *(GRV2) & original... 0.07 OrthoFinder output from all 47 species
Aev_g07335 GRV2, KAM2 vacuolar protein sorting co-chaperone *(GRV2) & original... 0.06 OrthoFinder output from all 47 species
Ala_g14655 GRV2, KAM2 vacuolar protein sorting co-chaperone *(GRV2) & original... 0.08 OrthoFinder output from all 47 species
Als_g62676 GRV2, KAM2 vacuolar protein sorting co-chaperone *(GRV2) & original... 0.04 OrthoFinder output from all 47 species
Aob_g35899 GRV2, KAM2 vacuolar protein sorting co-chaperone *(GRV2) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene23911.t1 GRV2, KAM2,... vacuolar protein sorting co-chaperone *(GRV2) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene41271.t1 GRV2, KAM2,... vacuolar protein sorting co-chaperone *(GRV2) & original... 0.06 OrthoFinder output from all 47 species
Azfi_s0006.g010400 GRV2, KAM2 vacuolar protein sorting co-chaperone *(GRV2) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0051.g031279 GRV2, KAM2 vacuolar protein sorting co-chaperone *(GRV2) & original... 0.04 OrthoFinder output from all 47 species
Cba_g07386 GRV2, KAM2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.32G022100.1 GRV2, KAM2,... vacuolar protein sorting co-chaperone *(GRV2) & original... 0.03 OrthoFinder output from all 47 species
Cre12.g486209 GRV2, KAM2 DnaJ homolog subfamily C GRV2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Dcu_g03222 GRV2, KAM2 vacuolar protein sorting co-chaperone *(GRV2) & original... 0.06 OrthoFinder output from all 47 species
GSVIVT01015441001 GRV2, KAM2 DnaJ homolog subfamily C GRV2 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
GSVIVT01015442001 GRV2, KAM2 DnaJ homolog subfamily C GRV2 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
Gb_33273 GRV2, KAM2 DnaJ homolog subfamily C GRV2 OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
LOC_Os10g42439.1 GRV2, KAM2,... DnaJ homolog subfamily C GRV2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Len_g14802 GRV2, KAM2 vacuolar protein sorting co-chaperone *(GRV2) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g05049 GRV2, KAM2 vacuolar protein sorting co-chaperone *(GRV2) & original... 0.05 OrthoFinder output from all 47 species
MA_10430431g0010 GRV2, KAM2 DnaJ homolog subfamily C GRV2 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
MA_10433773g0010 GRV2, KAM2 DnaJ homolog subfamily C GRV2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10436902g0010 GRV2, KAM2 DnaJ homolog subfamily C GRV2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_114130g0010 GRV2, KAM2 DnaJ homolog subfamily C GRV2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_134451g0010 GRV2, KAM2 DnaJ homolog subfamily C GRV2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp1g07450.1 GRV2, KAM2 DnaJ homolog subfamily C GRV2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g14374 GRV2, KAM2 vacuolar protein sorting co-chaperone *(GRV2) & original... 0.04 OrthoFinder output from all 47 species
Pir_g10474 GRV2, KAM2 vacuolar protein sorting co-chaperone *(GRV2) & original... 0.02 OrthoFinder output from all 47 species
Sam_g17507 No alias vacuolar protein sorting co-chaperone *(GRV2) & original... 0.06 OrthoFinder output from all 47 species
Smo165973 GRV2, KAM2 DnaJ homolog subfamily C GRV2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Solyc08g021920.4.1 GRV2, KAM2,... DnaJ homolog subfamily C GRV2 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Spa_g21894 GRV2, KAM2 vacuolar protein sorting co-chaperone *(GRV2) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR045802 GRV2/DNAJC13_N 920 1017
IPR045802 GRV2/DNAJC13_N 34 782
IPR025640 GYF_2 1190 1240
IPR001623 DnaJ_domain 1560 1600
No external refs found!