1. Home
  2. Species
  3. Ophioglossum reticulatum
  4. Sequence
  5. Ore_g38187

Ore_g38187


Description : component *(TFC4/Tau131) of TFIIIc transcription factor complex & original description: none


Gene families : OG0005499 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005499_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g38187
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
AT1G17680 No alias tetratricopeptide repeat (TPR)-containing protein 0.03 OrthoFinder output from all 47 species
Adi_g057371 No alias component *(TFC4/Tau131) of TFIIIc transcription factor... 0.02 OrthoFinder output from all 47 species
Als_g09355 No alias component *(TFC4/Tau131) of TFIIIc transcription factor... 0.02 OrthoFinder output from all 47 species
Aop_g38331 No alias component *(TFC4/Tau131) of TFIIIc transcription factor... 0.02 OrthoFinder output from all 47 species
Cre10.g464950 No alias RNA biosynthesis.RNA polymerase III-dependent... 0.03 OrthoFinder output from all 47 species
MA_10436561g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp3g23320.1 No alias component TFC4/Tau131 of TFIIIc transcription factor complex 0.02 OrthoFinder output from all 47 species
Ppi_g53204 No alias component *(TFC4/Tau131) of TFIIIc transcription factor... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR019734 TPR_repeat 334 358
IPR019734 TPR_repeat 197 218
No external refs found!