Aliases : SNL4
Description : not classified & original description: none
Gene families : OG0000547 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000547_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G10450 | SNL6 | SIN3-like 6 | 0.03 | OrthoFinder output from all 47 species | |
AT1G24190 | SNL3, ATSIN3, SIN3 | SIN3-like 3 | 0.04 | OrthoFinder output from all 47 species | |
AT1G24200 | No alias | Paired amphipathic helix (PAH2) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
AT3G01320 | SNL1 | SIN3-like 1 | 0.03 | OrthoFinder output from all 47 species | |
AT5G15020 | SNL2 | SIN3-like 2 | 0.04 | OrthoFinder output from all 47 species | |
Adi_g058426 | SNL4 | component *(SNL) of histone deacetylase machineries &... | 0.05 | OrthoFinder output from all 47 species | |
Adi_g088432 | SNL3, ATSIN3, SIN3 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g103364 | SNL4 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g05403 | SNL4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g52097 | SNL3, ATSIN3, SIN3 | component *(SNL) of histone deacetylase machineries &... | 0.03 | OrthoFinder output from all 47 species | |
Aob_g29157 | SNL3, ATSIN3, SIN3 | component *(SNL) of histone deacetylase machineries &... | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0048.g030537 | SNL4 | component *(SNL) of histone deacetylase machineries &... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.02G103800.1 | SNL4, Ceric.02G103800 | component *(SNL) of histone deacetylase machineries &... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.31G072300.1 | SNL4, Ceric.31G072300 | component *(SNL) of histone deacetylase machineries &... | 0.03 | OrthoFinder output from all 47 species | |
Cre03.g180800 | SNL4 | Paired amphipathic helix protein Sin3-like 4... | 0.01 | OrthoFinder output from all 47 species | |
Dde_g18720 | SNL3, ATSIN3, SIN3 | component *(SNL) of histone deacetylase machineries &... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01020136001 | SNL3, ATSIN3, SIN3 | Chromatin organisation.histone modifications.histone... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01032579001 | SNL2 | Chromatin organisation.histone modifications.histone... | 0.02 | OrthoFinder output from all 47 species | |
Gb_35988 | SNL4 | component SNL of histone deacetylase machineries | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g03517 | SNL3, ATSIN3, SIN3 | component *(SNL) of histone deacetylase machineries &... | 0.04 | OrthoFinder output from all 47 species | |
MA_18241g0010 | SNL4 | component SNL of histone deacetylase machineries | 0.02 | OrthoFinder output from all 47 species | |
Mp2g12120.1 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Msp_g06593 | SNL4 | component *(SNL) of histone deacetylase machineries &... | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g03860 | SNL3, ATSIN3, SIN3 | component *(SNL) of histone deacetylase machineries &... | 0.04 | OrthoFinder output from all 47 species | |
Pir_g13056 | SNL4 | component *(SNL) of histone deacetylase machineries &... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g18041 | SNL3, ATSIN3, SIN3 | component *(SNL) of histone deacetylase machineries &... | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g27695 | SNL3, ATSIN3, SIN3 | component *(SNL) of histone deacetylase machineries &... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g14557 | No alias | component *(SNL) of histone deacetylase machineries &... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g25571 | No alias | component *(SNL) of histone deacetylase machineries &... | 0.02 | OrthoFinder output from all 47 species | |
Solyc02g067570.3.1 | SNL2, Solyc02g067570 | component SNL of histone deacetylase machineries | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g087360.4.1 | SNL2, Solyc02g087360 | component SNL of histone deacetylase machineries | 0.03 | OrthoFinder output from all 47 species | |
Solyc05g006540.3.1 | SNL3, ATSIN3,... | component SNL of histone deacetylase machineries | 0.03 | OrthoFinder output from all 47 species | |
Spa_g18268 | SNL4 | component *(SNL) of histone deacetylase machineries &... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e017111_P002 | SNL4, Zm00001e017111 | component SNL of histone deacetylase machineries | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e018079_P001 | SNL4, Zm00001e018079 | Paired amphipathic helix protein Sin3-like 2... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e025644_P001 | SNL4, Zm00001e025644 | component SNL of histone deacetylase machineries | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0003876 | AMP deaminase activity | IEP | HCCA |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0006188 | IMP biosynthetic process | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | HCCA |
BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
BP | GO:0009123 | nucleoside monophosphate metabolic process | IEP | HCCA |
BP | GO:0009124 | nucleoside monophosphate biosynthetic process | IEP | HCCA |
BP | GO:0009126 | purine nucleoside monophosphate metabolic process | IEP | HCCA |
BP | GO:0009127 | purine nucleoside monophosphate biosynthetic process | IEP | HCCA |
BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009156 | ribonucleoside monophosphate biosynthetic process | IEP | HCCA |
BP | GO:0009161 | ribonucleoside monophosphate metabolic process | IEP | HCCA |
BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009167 | purine ribonucleoside monophosphate metabolic process | IEP | HCCA |
BP | GO:0009168 | purine ribonucleoside monophosphate biosynthetic process | IEP | HCCA |
BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
MF | GO:0016301 | kinase activity | IEP | HCCA |
MF | GO:0016740 | transferase activity | IEP | HCCA |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | HCCA |
MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | HCCA |
MF | GO:0019239 | deaminase activity | IEP | HCCA |
BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
BP | GO:0032261 | purine nucleotide salvage | IEP | HCCA |
BP | GO:0032264 | IMP salvage | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0043094 | cellular metabolic compound salvage | IEP | HCCA |
BP | GO:0043101 | purine-containing compound salvage | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
BP | GO:0043173 | nucleotide salvage | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0046040 | IMP metabolic process | IEP | HCCA |
BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
MF | GO:0047623 | adenosine-phosphate deaminase activity | IEP | HCCA |
BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | HCCA |
BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
BP | GO:0106380 | purine ribonucleotide salvage | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
MF | GO:1990380 | K48-linked deubiquitinase activity | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR031693 | Sin3_C | 262 | 509 |
No external refs found! |