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  5. Ore_g34792

Ore_g34792


Description : scaffold component *(Sec31) of coat protein complex & original description: none


Gene families : OG0003227 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003227_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g34792

Target Alias Description ECC score Gene Family Method Actions
AT3G63460 No alias transducin family protein / WD-40 repeat family protein 0.05 OrthoFinder output from all 47 species
Adi_g011556 No alias scaffold component *(Sec31) of coat protein complex &... 0.02 OrthoFinder output from all 47 species
Adi_g057724 No alias scaffold component *(Sec31) of coat protein complex &... 0.03 OrthoFinder output from all 47 species
Ala_g22457 No alias scaffold component *(Sec31) of coat protein complex &... 0.05 OrthoFinder output from all 47 species
Aob_g15456 No alias scaffold component *(Sec31) of coat protein complex &... 0.03 OrthoFinder output from all 47 species
Azfi_s0231.g059267 No alias scaffold component *(Sec31) of coat protein complex &... 0.03 OrthoFinder output from all 47 species
Cba_g13907 No alias scaffold component *(Sec31) of coat protein complex &... 0.02 OrthoFinder output from all 47 species
Ceric.02G027200.1 Ceric.02G027200 scaffold component *(Sec31) of coat protein complex &... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001154.3 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001154.4 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.01 OrthoFinder output from all 47 species
Cre12.g522450 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.03 OrthoFinder output from all 47 species
Dcu_g03156 No alias scaffold component *(Sec31) of coat protein complex &... 0.04 OrthoFinder output from all 47 species
GSVIVT01001441001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.04 OrthoFinder output from all 47 species
Gb_38895 No alias scaffolding component Sec31 of coat protein complex 0.05 OrthoFinder output from all 47 species
LOC_Os07g46370.1 LOC_Os07g46370 scaffolding component Sec31 of coat protein complex 0.02 OrthoFinder output from all 47 species
Len_g13782 No alias scaffold component *(Sec31) of coat protein complex &... 0.04 OrthoFinder output from all 47 species
Lfl_g04962 No alias scaffold component *(Sec31) of coat protein complex &... 0.05 OrthoFinder output from all 47 species
MA_10435529g0010 No alias scaffolding component Sec31 of coat protein complex 0.02 OrthoFinder output from all 47 species
MA_57417g0010 No alias scaffolding component Sec31 of coat protein complex 0.02 OrthoFinder output from all 47 species
Mp7g09730.1 No alias scaffolding component Sec31 of coat protein complex 0.02 OrthoFinder output from all 47 species
Nbi_g04454 No alias scaffold component *(Sec31) of coat protein complex &... 0.04 OrthoFinder output from all 47 species
Pir_g13045 No alias scaffold component *(Sec31) of coat protein complex &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016440 No alias scaffold component *(Sec31) of coat protein complex &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016441 No alias scaffold component *(Sec31) of coat protein complex &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0072.g016966 No alias scaffold component *(Sec31) of coat protein complex &... 0.02 OrthoFinder output from all 47 species
Smo230767 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.04 OrthoFinder output from all 47 species
Solyc01g088020.3.1 Solyc01g088020 scaffolding component Sec31 of coat protein complex 0.04 OrthoFinder output from all 47 species
Tin_g14980 No alias scaffold component *(Sec31) of coat protein complex &... 0.03 OrthoFinder output from all 47 species
Zm00001e010894_P003 Zm00001e010894 scaffolding component Sec31 of coat protein complex 0.07 OrthoFinder output from all 47 species
Zm00001e035747_P003 Zm00001e035747 scaffolding component Sec31 of coat protein complex 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
CC GO:0008303 caspase complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016255 attachment of GPI anchor to protein IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
CC GO:0042765 GPI-anchor transamidase complex IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR024298 ACE1_Sec16_Sec31 127 250
No external refs found!