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  5. Ore_g34159

Ore_g34159 (ATHMA1, HMA1)


Aliases : ATHMA1, HMA1

Description : P1B-type heavy metal cation-transporting ATPase *(HMA) & original description: none


Gene families : OG0006057 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006057_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g34159
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00237340 ATHMA1, HMA1,... Solute transport.primary active transport.P-type ATPase... 0.02 OrthoFinder output from all 47 species
Ceric.01G092000.1 ATHMA1, HMA1,... P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.02 OrthoFinder output from all 47 species
Len_g05450 ATHMA1, HMA1 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.03 OrthoFinder output from all 47 species
Lfl_g22883 ATHMA1, HMA1 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005849 mRNA cleavage factor complex IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006378 mRNA polyadenylation IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009092 homoserine metabolic process IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019346 transsulfuration IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0050667 homocysteine metabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!