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  5. Ore_g33891

Ore_g33891 (DBE1, ATISA2, BE2, ISA2)


Aliases : DBE1, ATISA2, BE2, ISA2

Description : component *(ISA2) of ISA1-ISA2 isoamylase heterodimer & original description: none


Gene families : OG0001139 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001139_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g33891

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00156p00067780 DBE1, ATISA2,... Carbohydrate metabolism.starch... 0.03 OrthoFinder output from all 47 species
AT1G03310 DBE1, ATISA2, BE2, ISA2 debranching enzyme 1 0.05 OrthoFinder output from all 47 species
AT2G39930 ATISA1, ISA1 isoamylase 1 0.03 OrthoFinder output from all 47 species
Aspi01Gene19694.t1 DBE1, ATISA2,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.31G027800.1 ATISA1, ISA1,... component *(ISA1) of ISA1-ISA2 isoamylase heterodimer &... 0.03 OrthoFinder output from all 47 species
Cre03.g207713 ATISA3, ISA3 Carbohydrate metabolism.starch... 0.04 OrthoFinder output from all 47 species
Lfl_g09920 ATISA3, ISA3 starch-debranching isoamylase *(ISA3) & original... 0.03 OrthoFinder output from all 47 species
MA_10431226g0020 ATISA1, ISA1 starch debranching enzyme. starch-debranching... 0.02 OrthoFinder output from all 47 species
Solyc06g009220.4.1 ATISA3, ISA3,... starch debranching enzyme. starch-debranching... 0.02 OrthoFinder output from all 47 species
Zm00001e021910_P001 ATISA1, ISA1,... starch debranching enzyme. starch-debranching... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004556 alpha-amylase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006047 Glyco_hydro_13_cat_dom 393 503
IPR004193 Glyco_hydro_13_N 227 324
No external refs found!