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  5. Ore_g33226

Ore_g33226 (PFU2, UBC23)


Aliases : PFU2, UBC23

Description : E2 ubiquitin-conjugating protein *(PHO2) & original description: none


Gene families : OG0001231 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001231_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g33226
Cluster HCCA: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00271430 PFU2, UBC23,... Probable ubiquitin-conjugating enzyme E2 23... 0.02 OrthoFinder output from all 47 species
Adi_g089077 PFU2, UBC23 E2 ubiquitin-conjugating protein *(PHO2) & original... 0.02 OrthoFinder output from all 47 species
Als_g15215 PFU2, UBC23 E2 ubiquitin-conjugating protein *(PHO2) & original... 0.04 OrthoFinder output from all 47 species
Als_g33748 PFU2, UBC23 E2 ubiquitin-conjugating protein *(PHO2) & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0155.g053602 PFU2, UBC23 E2 ubiquitin-conjugating protein *(PHO2) & original... 0.02 OrthoFinder output from all 47 species
Cba_g72571 PFU2, UBC23 E2 ubiquitin-conjugating protein *(PHO2) & original... 0.02 OrthoFinder output from all 47 species
Cre04.g212401 No alias Probable ubiquitin-conjugating enzyme E2 25... 0.02 OrthoFinder output from all 47 species
Cre08.g383702 No alias Putative ubiquitin-conjugating enzyme E2 39... 0.02 OrthoFinder output from all 47 species
Dcu_g13320 PFU2, UBC23 E2 ubiquitin-conjugating protein *(PHO2) & original... 0.05 OrthoFinder output from all 47 species
Dde_g11285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014343001 UBC25, PFU1 Probable ubiquitin-conjugating enzyme E2 25... 0.02 OrthoFinder output from all 47 species
GSVIVT01020551001 UBC25, PFU1 Probable ubiquitin-conjugating enzyme E2 25... 0.02 OrthoFinder output from all 47 species
GSVIVT01024005001 PFU2, UBC23 Probable ubiquitin-conjugating enzyme E2 23... 0.04 OrthoFinder output from all 47 species
Gb_29475 PFU2, UBC23 ubiquitin-conjugating E2 protein (PHO2) 0.06 OrthoFinder output from all 47 species
MA_10435569g0010 PFU2, UBC23 Probable ubiquitin-conjugating enzyme E2 23... 0.02 OrthoFinder output from all 47 species
Mp7g09720.1 PFU2, UBC23 Probable ubiquitin-conjugating enzyme E2 23... 0.03 OrthoFinder output from all 47 species
Sam_g08457 No alias E2 ubiquitin-conjugating protein *(PHO2) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 850 994
No external refs found!