Ore_g32978 (ATCLC-C, CLC-C)

Aliases : ATCLC-C, CLC-C

Description : anion channel / anion:proton antiporter *(CLC) & original description: none

Gene families : OG0000501 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000501_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ore_g32978

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00013p00233550	ATCLC-B, CLC-B,...	Solute transport.carrier-mediated transport.CLC anion...	0.03	OrthoFinder output from all 47 species
AT5G33280	No alias	Voltage-gated chloride channel family protein	0.02	OrthoFinder output from all 47 species
AT5G40890	CLC-A, ATCLC-A,...	chloride channel A	0.04	OrthoFinder output from all 47 species
Aev_g41935	ATCLC-B, CLC-B	anion channel / anion:proton antiporter *(CLC) &...	0.02	OrthoFinder output from all 47 species
Aop_g22484	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.02	OrthoFinder output from all 47 species
Aspi01Gene39433.t1	Aspi01Gene39433	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.03G016200.1	CLC-D, ATCLC-D,...	anion channel / anion:proton antiporter *(CLC) &...	0.03	OrthoFinder output from all 47 species
Cre09.g404100	CLC-D, ATCLC-D	Solute transport.carrier-mediated transport.CLC anion...	0.02	OrthoFinder output from all 47 species
Cre13.g574000	CLC-D, ATCLC-D	Chloride channel protein CLC-c OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Dac_g06430	ATCLC-B, CLC-B	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g02876	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.02	OrthoFinder output from all 47 species
Gb_06773	No alias	anion channel / anion:proton antiporter (CLC)	0.03	OrthoFinder output from all 47 species
Gb_17660	ATCLC-C, CLC-C	anion channel / anion:proton antiporter (CLC)	0.03	OrthoFinder output from all 47 species
Pnu_g01742	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.03	OrthoFinder output from all 47 species
Ppi_g29991	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.02	OrthoFinder output from all 47 species
Ppi_g61152	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.02	OrthoFinder output from all 47 species
Smo100906	ATCLC-C, CLC-C	Solute transport.carrier-mediated transport.CLC anion...	0.02	OrthoFinder output from all 47 species
Solyc01g103140.3.1	ATCLC-C, CLC-C,...	anion channel / anion:proton antiporter (CLC)	0.02	OrthoFinder output from all 47 species
Spa_g12049	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.03	OrthoFinder output from all 47 species
Spa_g12289	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.03	OrthoFinder output from all 47 species
Spa_g39978	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	None	Extended
MF	GO:0005244	voltage-gated monoatomic ion channel activity	None	Extended
MF	GO:0005247	voltage-gated chloride channel activity	IEA	Interproscan
MF	GO:0005253	monoatomic anion channel activity	None	Extended
MF	GO:0005254	chloride channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006820	monoatomic anion transport	None	Extended
BP	GO:0006821	chloride transport	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008308	voltage-gated monoatomic anion channel activity	None	Extended
MF	GO:0008509	monoatomic anion transmembrane transporter activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015103	inorganic anion transmembrane transporter activity	None	Extended
MF	GO:0015108	chloride transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
BP	GO:0015698	inorganic anion transport	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022832	voltage-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022839	monoatomic ion gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	HCCA
BP	GO:0000350	generation of catalytic spliceosome for second transesterification step	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005507	copper ion binding	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
MF	GO:0010333	terpene synthase activity	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0022618	ribonucleoprotein complex assembly	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
MF	GO:0042393	histone binding	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
BP	GO:0071826	ribonucleoprotein complex subunit organization	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001807	Cl-channel_volt-gated	152	572

External Links

No external refs found!

Ore_g32978 (ATCLC-C, CLC-C)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation