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  5. Ore_g29733

Ore_g29733 (AP19)


Aliases : AP19

Description : small subunit sigma of AP-1 trans-Golgi network cargo adaptor complex & original description: none


Gene families : OG0004438 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004438_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g29733

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00186170 AP19,... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.06 OrthoFinder output from all 47 species
Adi_g025276 AP19 small subunit sigma of AP-3 Golgi to vacuole cargo... 0.02 OrthoFinder output from all 47 species
Dcu_g24121 AP19 small subunit sigma of AP-3 Golgi to vacuole cargo... 0.03 OrthoFinder output from all 47 species
Ehy_g01910 No alias small subunit sigma of AP-3 Golgi to vacuole cargo... 0.03 OrthoFinder output from all 47 species
Lfl_g17082 AP19 small subunit sigma of AP-3 Golgi to vacuole cargo... 0.04 OrthoFinder output from all 47 species
MA_130401g0010 AP19 small subunit sigma of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Pir_g12753 AP19 small subunit sigma of AP-3 Golgi to vacuole cargo... 0.03 OrthoFinder output from all 47 species
Pp3c4_27730V3.1 AP19, Pp3c4_27730 associated protein 19 0.01 OrthoFinder output from all 47 species
Solyc11g005220.2.1 Solyc11g005220 small subunit sigma of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Tin_g24633 AP19 small subunit sigma of AP-3 Golgi to vacuole cargo... 0.02 OrthoFinder output from all 47 species
Zm00001e005895_P003 AP19, Zm00001e005895 small subunit sigma of AP-1 trans-Golgi network cargo... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
CC GO:0005751 mitochondrial respiratory chain complex IV IEP HCCA
BP GO:0006488 dolichol-linked oligosaccharide biosynthetic process IEP HCCA
BP GO:0006490 oligosaccharide-lipid intermediate biosynthetic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
CC GO:0045277 respiratory chain complex IV IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR022775 AP_mu_sigma_su 1 141
No external refs found!