Ore_g29244 (AP2, FLO2, FL1)

Aliases : AP2, FLO2, FL1

Description : AP2-type transcription factor *(WRI/AIL) & original description: none

Gene families : OG0000110 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ore_g29244
Cluster	HCCA: Cluster_128

Target	Alias	Description	ECC score	Gene Family Method
AT2G28550	RAP2.7, TOE1	related to AP2.7	0.05	OrthoFinder output from all 47 species
AT5G67180	TOE3	target of early activation tagged (EAT) 3	0.04	OrthoFinder output from all 47 species
Ala_g26834	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Als_g01822	ADAP	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene24152.t1	PLT2, Aspi01Gene24152	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Azfi_s0006.g010452	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Ceric.32G008600.1	BBM, Ceric.32G008600	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Dcu_g08873	AP2, FLO2, FL1	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Dcu_g47713	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Ehy_g06863	AP2, FLO2, FL1	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Ehy_g17996	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.05	OrthoFinder output from all 47 species
Gb_00766	AP2, FLO2, FL1	transcription factor (AP2)	0.05	OrthoFinder output from all 47 species
Gb_29561	No alias	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
Len_g46694	AP2, FLO2, FL1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g28976	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Ore_g04250	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Pp3c12_15970V3.1	Rap2.6L, Pp3c12_15970	Integrase-type DNA-binding superfamily protein	0.01	OrthoFinder output from all 47 species
Pp3c12_16100V3.1	Rap2.6L, Pp3c12_16100	Integrase-type DNA-binding superfamily protein	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000274	AP2, FLO2, FL1	not classified & original description: CDS=216-980	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0198.g025541	TOE3	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Sam_g36453	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Smo98831	AP2, FLO2, FL1	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	OrthoFinder output from all 47 species
Solyc11g010710.2.1	PLT3, AIL6,...	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
Spa_g20342	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e005817_P003	DRG, CKC, CKC1,...	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
Zm00001e006752_P001	AP2, FLO2, FL1,...	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003712	transcription coregulator activity	IEP	HCCA
MF	GO:0005509	calcium ion binding	IEP	HCCA
BP	GO:0005984	disaccharide metabolic process	IEP	HCCA
BP	GO:0005991	trehalose metabolic process	IEP	HCCA
BP	GO:0005992	trehalose biosynthetic process	IEP	HCCA
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	HCCA
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
BP	GO:0009311	oligosaccharide metabolic process	IEP	HCCA
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	HCCA
BP	GO:0010035	response to inorganic substance	IEP	HCCA
BP	GO:0010167	response to nitrate	IEP	HCCA
BP	GO:0015698	inorganic anion transport	IEP	HCCA
BP	GO:0015706	nitrate transmembrane transport	IEP	HCCA
BP	GO:0016051	carbohydrate biosynthetic process	IEP	HCCA
CC	GO:0016592	mediator complex	IEP	HCCA
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0046351	disaccharide biosynthetic process	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098661	inorganic anion transmembrane transport	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
BP	GO:1901698	response to nitrogen compound	IEP	HCCA
BP	GO:1901700	response to oxygen-containing compound	IEP	HCCA
BP	GO:1902025	nitrate import	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	259	307
IPR001471	AP2/ERF_dom	350	399

External Links

No external refs found!

Ore_g29244 (AP2, FLO2, FL1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation