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  5. Ore_g21654

Ore_g21654


Description : not classified & original description: none


Gene families : OG0001354 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001354_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g21654
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Ore_g08111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08112 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g09681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g14036 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g14320 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g15989 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g21829 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g29811 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37406 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38462 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000381 regulation of alternative mRNA splicing, via spliceosome IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016556 mRNA modification IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0043484 regulation of RNA splicing IEP HCCA
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP HCCA
BP GO:0050684 regulation of mRNA processing IEP HCCA
BP GO:0080009 mRNA methylation IEP HCCA
BP GO:1903311 regulation of mRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 202 218
No external refs found!