Aliases : PNH, AGO10, ZLL
Description : not classified & original description: none
Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00040p00171410 | AGO7, ZIP,... | Protein argonaute 7 OS=Oryza sativa subsp. japonica | 0.02 | OrthoFinder output from all 47 species | |
Adi_g113326 | AGO1 | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.02 | OrthoFinder output from all 47 species | |
Aop_g10666 | AGO1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene29036.t1 | AGO4, OCP11,... | siRNA-integrating factor *(AGO) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene68511.t1 | AGO1, Aspi01Gene68511 | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.03 | OrthoFinder output from all 47 species | |
Cre02.g141050 | AGO1 | Protein argonaute PNH1 OS=Oryza sativa subsp. japonica | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os02g58490.1 | AGO1, LOC_Os02g58490 | RIS-Complex miRNA recruiting factor (AGO1) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os04g06770.2 | AGO4, OCP11,... | siRNA-integrating factor (AGO) | 0.02 | OrthoFinder output from all 47 species | |
Mp1g23190.1 | AGO9 | siRNA-integrating factor (AGO) | 0.02 | OrthoFinder output from all 47 species | |
Solyc01g008960.3.1 | AGO4, OCP11,... | siRNA-integrating factor (AGO) | 0.04 | OrthoFinder output from all 47 species | |
Solyc02g069260.3.1 | AGO2, Solyc02g069260 | siRNA-binding factor (AGO2) of non-canonical RdDM pathway | 0.02 | OrthoFinder output from all 47 species | |
Solyc03g098280.4.1 | AGO1, Solyc03g098280 | RIS-Complex miRNA recruiting factor (AGO1) | 0.03 | OrthoFinder output from all 47 species | |
Solyc07g049500.3.1 | AGO6, Solyc07g049500 | siRNA-integrating factor (AGO) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e004997_P001 | PNH, AGO10, ZLL,... | Protein argonaute 18 OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e005271_P001 | AGO1, Zm00001e005271 | Protein argonaute 12 OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e025496_P001 | AGO4, OCP11,... | siRNA-integrating factor (AGO) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e029696_P001 | AGO1, Zm00001e029696 | RIS-Complex miRNA recruiting factor (AGO1) | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
MF | GO:0004556 | alpha-amylase activity | IEP | HCCA |
BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
BP | GO:0005984 | disaccharide metabolic process | IEP | HCCA |
BP | GO:0005991 | trehalose metabolic process | IEP | HCCA |
BP | GO:0005992 | trehalose biosynthetic process | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
BP | GO:0009311 | oligosaccharide metabolic process | IEP | HCCA |
BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | HCCA |
BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
MF | GO:0016160 | amylase activity | IEP | HCCA |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
MF | GO:0016836 | hydro-lyase activity | IEP | HCCA |
MF | GO:0016866 | intramolecular transferase activity | IEP | HCCA |
MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | HCCA |
BP | GO:0031123 | RNA 3'-end processing | IEP | HCCA |
BP | GO:0031124 | mRNA 3'-end processing | IEP | HCCA |
BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
BP | GO:0046351 | disaccharide biosynthetic process | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No external refs found! |